Planococcus shixiaomingii: QWY21_12590
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Entry
QWY21_12590 CDS
T10328
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pshx Planococcus shixiaomingii
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshx03016
]
QWY21_12590 (truB)
Enzymes [BR:
pshx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QWY21_12590 (truB)
Transfer RNA biogenesis [BR:
pshx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QWY21_12590 (truB)
Prokaryotic type
QWY21_12590 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WKA53498
LinkDB
All DBs
Position
complement(2513239..2514168)
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AA seq
309 aa
AA seq
DB search
MAINGILPLWKERGMTSHDCVFKLRKILKTKKVGHTGTLDPEVDGVLPICIGNTTKVAEY
ITDQGKSYEAEVTIGYSTETEDATGELVTSDDSEKHITKEQLLEVFEGLTGEIVQIPPMY
SAVKVNGKKLYEYARQGIAVERPSRIVRIDAIELMDDQQEWHGQRVKFNIRIRCGKGTYI
RTLAVQIGQALGYPAHMSRLTRTQSGKFRREDCVTLAEVAELAQNERVNTILKPLSYGLS
VFPFAEIEEKDIFAIQNGQVLKRHSILEEQEFVVFTVKGNPLALYKRHPEKADKMKPEKM
FGIPTTDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacggcattttgccattatggaaagagcggggcatgacttcgcatgattgc
gtgtttaaactgcggaaaattttaaaaacgaaaaaagtggggcatacgggaactttagat
cctgaagtagatggagttttgccgatttgtatcggaaacaccaccaaagtggctgaatat
ataactgaccaaggaaaatcgtatgaagcggaagtgacaattggctattcgactgaaacg
gaagatgcgacaggcgaattggtcacaagtgatgacagcgaaaagcacattacaaaagaa
cagttgctggaggtatttgaaggtctgaccggggaaattgttcaaattcctccgatgtac
tcggcggtcaaagtaaatggcaaaaagctttatgaatatgcccgtcaaggcatcgcggtc
gaacgcccttcgcgcattgtccgcattgatgctattgaattgatggacgatcaacaggaa
tggcacggacaaagagtgaagttcaatatccgcatccgctgtggcaaaggaacgtatatc
cgtacactggccgttcaaatcgggcaagcgttaggctatccggcgcatatgtccaggctg
acgcggacgcaatcaggaaaattcagacgagaagattgcgtaacacttgccgaagtcgct
gaacttgcgcaaaatgaaagagtaaacaccattttgaaaccactcagctacggcttaagt
gtttttccgtttgcagaaatagaagaaaaagatatttttgccattcaaaacggccaagta
cttaagcgccattccatccttgaagaacaagagtttgtggtgtttactgtcaaaggaaat
cctttagccctttacaaaaggcatcctgaaaaagcggataagatgaagccagaaaaaatg
tttggcataccgacaactgacgaggtgtaa
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