Planococcus shixiaomingii: QWY21_14055
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Entry
QWY21_14055 CDS
T10328
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pshx Planococcus shixiaomingii
Pathway
pshx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWY21_14055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshx03000
]
QWY21_14055
Transcription factors [BR:
pshx03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWY21_14055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
HTH_3
TPR_19
TPR_10
RMD1-3
TPR_MalT
TPR_11
TPR_INTS8_3
HTH_31
CFAP70_TPR_C
TPR_NPHP3
HTH_26
HTH_19
TPR_7
TPR_YpiA_C
Motif
Other DBs
NCBI-ProteinID:
WKA53780
LinkDB
All DBs
Position
2818996..2820297
Genome browser
AA seq
433 aa
AA seq
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MEIGFRLKYHRIKKKMSVEELASGIIPSRELKKIEAGAKAPSLEDLQALCKKLEISLAPK
DNPIGKVLVKNFKSSLLHPQNKGKIMEQYADIHDHPLLHVDEDIELEYSIQQIRYFIITG
DLDSADEKIKEMDRFKEFMTQEQFYLFHKYNGNYHYILNDYEQALKTYLLAEKIAPPSLS
ASETGDLYYSIGISATQCWAFSLAYKYSEMALKIYQQEFIPKRIAECHLNIAINERRVGN
FKTAKEHYKHALTIGQKLDNEVIKFSTLYNYGYFYFQFQNFELAIEHLEDAMQFIPKEYT
SDVLLNYCILIKCYIELDNYDAAKEMLIKGQEIIKEKNLTLETPSNSLFKEVYVEFMCLF
YYVNEEFNNFEDYLLGKLVPLLESHNKYFEIGFYYGHLGNTYIKLGEYEKSALILREATK
AYKKLMTFNEERS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggattccggctcaaatatcatcgtataaaaaagaaaatgagtgtggaagaa
ctggcatccggcattatcccttcacgtgaactaaagaaaatagaagccggggctaaagcg
ccttctcttgaggatttgcaagccttatgtaaaaagttagaaatttctttagctccgaaa
gataatccgattggaaaagtattagttaagaactttaaatcttctttgttgcatccgcaa
aataaaggtaaaattatggagcagtatgcagatattcatgatcatcctttacttcatgta
gatgaagatattgagttggaatattctattcaacaaatccggtattttattattactgga
gatttggacagtgcagatgaaaagataaaagagatggatcgttttaaagagttcatgacc
caagaacagttttacttatttcataaatacaacgggaattaccattatattttaaatgac
tatgaacaagctttaaaaacctatcttttagctgagaaaattgctcccccttcgctctcc
gcctccgaaacaggggatttgtactactcaatcggcattagcgctactcaatgttgggct
tttagcttagcttataaatattctgaaatggctttaaaaatataccaacaggaatttata
ccaaaacgaattgcagaatgccacttaaatattgctattaatgagcgcagagttggtaat
tttaaaaccgcgaaagagcattacaaacatgcacttacaataggtcaaaaattagacaat
gaagttataaaatttagcacactatacaactatggttatttttatttccagtttcagaac
tttgagttagcgattgaacatcttgaggatgcaatgcagtttattccaaaagaatataca
tcggatgttttactaaattattgcattttaattaagtgctatattgaacttgataactat
gatgctgctaaagaaatgctaataaaaggtcaagaaattataaaggaaaaaaacttaaca
cttgaaactccatcaaatagtctttttaaagaagtgtatgtagagtttatgtgccttttt
tattatgttaacgaagaattcaataatttcgaagactacctattaggcaaattggtaccc
ttattagagagtcataataaatactttgaaataggtttttactatggacatttaggtaat
acttacattaaacttggtgagtatgagaaatctgcactaattttaagagaagctacaaag
gcctacaaaaaattaatgacatttaacgaggagcgaagttaa
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