Planococcus shixiaomingii: QWY21_15680
Help
Entry
QWY21_15680 CDS
T10328
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pshx Planococcus shixiaomingii
Pathway
pshx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pshx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QWY21_15680 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pshx03021
]
QWY21_15680 (rpoE)
03400 DNA repair and recombination proteins [BR:
pshx03400
]
QWY21_15680 (rpoE)
Transcription machinery [BR:
pshx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWY21_15680 (rpoE)
DNA repair and recombination proteins [BR:
pshx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWY21_15680 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
ColG_sub
Motif
Other DBs
NCBI-ProteinID:
WKA54094
LinkDB
All DBs
Position
complement(3209018..3209662)
Genome browser
AA seq
214 aa
AA seq
DB search
MKIRELSKEELIEESFVDLTYAMLEETHETKTYAELITEIENLLGLSKEDMKARLVQFYT
DMNIDGRFLILGENRWGLREWYPVEQIEEESAPTVKARKKKAKTADDDDFDDLDLELEDE
LEFDDFDEDDEDEEEDVIDLGLGIVDEDEEDDEDDEIKLPVEVDEVLDFDEDEDEEVVEV
LVDDLDADILDEEEDLDADLETDNEIDEDDEELK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgtgaattatcaaaagaagaactgatagaagagtcgtttgttgacttgaca
tatgcaatgcttgaagaaacacacgaaacaaaaacgtatgcagaacttataactgaaatc
gagaatttgcttggcttgtccaaagaagatatgaaagcccgtttggtgcaattttatacc
gacatgaacatcgatggccgtttcttgattcttggagaaaaccgctggggtcttcgcgaa
tggtatccagtagagcagatcgaagaagagtcggcaccaacagttaaagcacgcaagaag
aaagcgaaaactgctgatgatgacgatttcgatgatttggatcttgaattggaagatgaa
ttagaatttgacgatttcgatgaagacgatgaggacgaagaggaagatgttatcgaccta
ggccttggaatcgttgatgaagacgaagaagatgacgaagatgatgaaattaaattgccg
gtcgaagttgatgaagtgcttgattttgacgaggatgaggacgaagaagtcgtagaagtt
cttgtggatgacttggatgctgacatcctcgacgaagaagaagatctcgatgccgacctt
gaaaccgataatgaaattgatgaagacgacgaagaactgaagtaa
DBGET
integrated database retrieval system
