Providencia stuartii MRSN 2154: S70_11635
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Entry
S70_11635 CDS
T02042
Name
(GenBank) transcription termination factor Rho, polarity suppressor
KO
K03628
transcription termination factor Rho
Organism
psi
Providencia stuartii MRSN 2154
Pathway
psi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S70_11635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psi03021
]
S70_11635
03019 Messenger RNA biogenesis [BR:
psi03019
]
S70_11635
Transcription machinery [BR:
psi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
S70_11635
Messenger RNA biogenesis [BR:
psi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
S70_11635
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Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AFH94175
LinkDB
All DBs
Position
2496525..2497784
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
FDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLISKLAMTKTNEEFFDFMKRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtatcagaattgattacattaggcgaaaac
atggggctagaaaacttagcccgtatgagaaagcaggatattatcttctcgattttgaag
cagcatgctaaaagcggggaggatatcttcggcgatggcgttctggaaatattgcaggat
ggatttggtttcctccgttcagcagacagttcctacctcgcaggccccgatgatatctac
gtttctcccagccaaattcgccgcttcaaccttcgcacaggcgatacaatttcaggaaaa
atccgtcctcctaaagaaggtgaacgctattttgccctattgaaagttaatgaagttaac
tttgataaacctgaaaatgcccgcagcaaaattctctttgaaaacttaaccccattacat
gctaacaatcgtcttcgtatggaacgtggaaacggttctacagaagatttaaccgcgcgt
gttttggatttagctgcgcctatcggccgtgggcaacgtggtttgatcgttgctccacca
aaagcaggtaaaaccatgttgctgcaaaatatcgcggctaacattgcacataactaccct
gattgtgttttgatggttctgcttattgatgagcgtccagaagaagttaccgaaatgcaa
cgcctagttaaaggtgaagtaatcgcttcaacgtttgatgagccagcagcacgtcacgtt
caagtcgccgaaatggtgattgaaaaagctaaacgtttagttgagcataaaaaagacgtt
atcattttacttgattctattactcgtcttgcgcgagcgtataacactgttgttccttca
tcaggtaaagtcttaacaggtggtgtggatgcgaatgcgttacaccgtccgaagcgtttc
tttggtgcagcacgtaacgttgaagaaggtggtagtttaaccattattgcaacagcgctc
gtcgacacaggctccaaaatggacgaagtgatttacgaagagtttaaaggtacaggtaac
atggaactacacctgtctcgtaagatcgctgaaaaacgtgttttccctgcgattgactat
aaccgttcaggtacacgtaaagaagagctgttaacttcacaagatgaattacaaaaaatg
tggattttacgtaagatcattcatcctatgggtgagatcgatgcaatggaattcctcatt
agtaaattagcaatgacgaaaacgaacgaagaatttttcgattttatgaaaagagcataa
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