Providencia stuartii MRSN 2154: S70_12200
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Entry
S70_12200 CDS
T02042
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psi
Providencia stuartii MRSN 2154
Pathway
psi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S70_12200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psi03019
]
S70_12200
03009 Ribosome biogenesis [BR:
psi03009
]
S70_12200
Enzymes [BR:
psi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
S70_12200
Messenger RNA biogenesis [BR:
psi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
S70_12200
Ribosome biogenesis [BR:
psi03009
]
Prokaryotic type
rRNA helicases
S70_12200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFH94287
UniProt:
A0A140NNP4
LinkDB
All DBs
Position
2621578..2623446
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AA seq
622 aa
AA seq
DB search
MTTETDISFADLGLSASILTALNDLGYEKPSPIQKQCIPLLMDGNDVLGMAQTGSGKTAA
FSLPLLHNIDPDLKAPQILVLAPTRELAVQVAEAMGDFSKHMSRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKEPKEIRIQASITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDSQLLSERRQAKFAEKIQQQFESSDLDQYRALLKKLSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRRDRNGNGFDRAERGDRSGRRERR
DVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFGSHSTIELPKGMPTEV
LTHLSRARILNKPMQMQLIGDAQPFERRERRGGSRRDGGFNGERRNDREGGNRRGGHRGN
GRGRNEDHNSAAPRRRSTSHNA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagactgatatctctttcgctgatttaggtttatcagcgtctattttgact
gcactaaacgacctgggatatgaaaaaccttctccgatccaaaaacaatgtattccattg
ttaatggacggtaatgatgtgttgggtatggcacagacggggagcggtaaaaccgcagcc
tttagtttgccgctactgcacaacattgatccagatttaaaagctccgcaaattctagtc
ctagccccaacacgtgagttggcggttcaggttgctgaagcgatgggcgatttttctaaa
cacatgagccgtgttaacgtggtggccctatatggtggccagcgttacgacgtgcaattg
cgtgctttgcgccaagggccacaagttgttgtaggaacgcctgggcgtctgcttgatcat
ctgaaacgcggtacattagacctgtctaaattgaaaggcttagtactggatgaagctgat
gaaatgctgcgtatgggctttattgaagatgttgaaaacatcatgagccaaatcccagca
gagcatcaaacagcgctgttttcagcgacgatgccagaaccaattcgtcgtataacacgc
cgtttcatgaaagagcctaaagaaattcgtattcaggctagcattacaacacgtccagat
attgctcaaagctattggactgtttacggcatgcgcaaaaatgaggctctggttcgtttc
ttagaagccgaagattttgacgcagcaattatttttgttcgtacaaagaatgcaacgctg
gaagtggcagaagcgcttgagcgcaacggttataacagtgctgcattgaacggtgatatg
aaccaagcgttacgtgaacaaacgctagaacgtttaaaagacggtcgtttggatattttg
atcgccactgacgttgctgctcgtggtcttgatgttgaccgtattagcttagtcgttaac
tatgacatcccaatggatgcagagtcttacgttcaccgtatcggtcgtactggccgtgca
gggcgtgctggccgtgcactcttgttcgtagagaaccgtgagcgtcgtttgctgcgtaac
gttgaacgcaccatgaagctaacgatccctgaagttgaactgccagattcacaattgcta
agtgaacgtcgtcaggcgaaatttgctgaaaaaatccaacagcaatttgaaagcagtgac
ttagaccaataccgcgcgctgttaaagaaactgtcaccgtcagaagatgttgatatggaa
acattggccgccgcgttgctaaaaatggctcaaggtgagcgtgcacttattctgccacca
gatgcaccgcgtcgcccacgtcgtgaattcaatgaccgtgatgatcgccgtcgtgatcgt
aatggcaatggctttgaccgtgcagagcgtggtgatcgtagtggtcgtcgtgagcgccgt
gatgttggcgatatggaaatgtatcgcatcgaagtcggccgtgatgatggcgtagaagtg
cgtcacattgtaggggcgattgccaatgaagcggatattagcagccgttatattggtaat
atcaagctgtttggctctcactcaacgattgagctaccaaaaggcatgccaaccgaagtg
ttaactcacttaagccgtgcacgcattttgaataaaccaatgcaaatgcaattaattggt
gatgcacagccgtttgaacgtcgtgagcgtcgtggtggttcacgccgtgacggtggcttt
aatggtgagcgtcgcaacgaccgtgagggtggcaatcgtcgtggtggccatcgtggtaac
ggacgtggtcgtaatgaagatcacaactcggcagctccgcgccgccgtagcaccagccat
aatgcttaa
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