Pectobacterium sinaloense: ACSJGL_03220
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Entry
ACSJGL_03220 CDS
T11740
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psia Pectobacterium sinaloense
Pathway
psia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACSJGL_03220 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psia03400
]
ACSJGL_03220 (ung)
Enzymes [BR:
psia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACSJGL_03220 (ung)
DNA repair and recombination proteins [BR:
psia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACSJGL_03220 (ung)
Prokaryotic type
ACSJGL_03220 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XXR13088
LinkDB
All DBs
Position
complement(733838..734524)
Genome browser
AA seq
228 aa
AA seq
DB search
MATSLTWHDVLAQEKQQPYFINTLEFVGKERAAGKTIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLTNIYKELASDIPGFEIPQHGFLQSWAEQGVL
LLNTVLTVEAGQAHSHANLGWETFTDRVIAALNEQREGLVFLLWGAHAQKKGNIINQQRH
HILKSPHPSPLSAHRGFLGCKHFSQANQLLEQQGLSPIDWMPRLPEEA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctctctcacctggcatgacgtgctggcacaagaaaaacagcagccttatttt
atcaatacccttgaattcgttggaaaagaacgtgcagcgggtaagactatctatcccccg
cagaaggatgttttcaacgcattccgctttaccgaactgcatcaggtcaaagtcgtcatt
ctgggacaggacccctatcacggcccgaatcaggcacacgggctgtcattttctgtccgc
cccggcgtacccgctccgccttctctgaccaatatttataaagaattagccagcgacatc
cctggatttgaaattccacagcacggttttctgcaaagttgggcggaacaaggcgtttta
ctgctcaataccgtattaaccgttgaagccgggcaggcacattcgcatgccaatctgggc
tgggaaacgtttaccgaccgtgtgattgcggcactcaatgagcagcgggaaggtctagtc
tttctgctctggggagcgcatgcccagaagaaaggcaatattattaaccaacagcgccac
catattctgaaatcaccgcacccttcccccctatctgcacaccgcggtttcctcggctgc
aaacatttttctcaggctaaccaacttctcgaacagcaaggattatcgccaatagactgg
atgccaaggcttccagaagaggcctaa
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