Pectobacterium sinaloense: ACSJGL_08665
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Entry
ACSJGL_08665 CDS
T11740
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psia Pectobacterium sinaloense
Brite
KEGG Orthology (KO) [BR:
psia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psia03032
]
ACSJGL_08665 (topA)
03400 DNA repair and recombination proteins [BR:
psia03400
]
ACSJGL_08665 (topA)
Enzymes [BR:
psia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACSJGL_08665 (topA)
DNA replication proteins [BR:
psia03032
]
Prokaryotic type
DNA Topoisomerases
ACSJGL_08665 (topA)
DNA repair and recombination proteins [BR:
psia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACSJGL_08665 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
YubG_C
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XXR12768
LinkDB
All DBs
Position
complement(1909434..1912031)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHVRDLPTSGSVKKSADSTTKDKTKKKVK
KDEKSALVNRMGVDPYHGWKANYEILPGKEKVVSELKTLAENADHIYLATDLDREGEAIA
WHLREIIGGEDARFSRVVFNEITKNAIKQAFEKPDTLNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLIVDREREIKAFVPEEYWELHADLLAGSDIQLQMQVTH
HNGKPFKPVNKAQTQAAVSLLENARYKVADREDKPTSSKPSAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDALTMVRDYIGDEFGKRYLPESANLYSSKEN
SQEAHEAIRPSDVGVLADSLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLIVEAADY
QLRAKGRTLRFDGWTKVMPALRKNDEDRTLPTVAVGEALTLQKLLPGQHFTKPPARYSDA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTARMESRLDQVANNQAEWKAVLDEFFNEFSQQLEKAEQDPEEGGMRPNAMVLTSIDCP
TCSRQMGIRTASTGVFLGCSGYALSPKERCKTTINLIPENEVLNVLEGDDAETNALRARR
RCEKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIETGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNESCGNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELVRFKDRLPEKLRYLAEAPAVDKDGNKTQVRFSRKTKQQYV
SSEKDGKATGWSAFYIDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgtcgagtccccggcaaaagccaaaacgatcaacaagtat
ttaggcaatgactacgtggtgaaatccagcgttggtcatgtgcgcgatctgccgacgagt
ggctcagttaaaaagagcgcggactcaacgactaaagataaaacgaaaaagaaagtcaaa
aaggatgaaaaatctgcgctggttaatcgtatgggcgtcgacccttatcatggctggaaa
gccaactacgaaatactgccgggtaaggagaaggtcgtctccgaattaaaaacgttggcg
gaaaatgctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaaatcattggtggtgaagatgcgcgtttcagccgcgtggtgtttaat
gaaatcacgaaaaatgccattaaacaggcatttgaaaagccagacaccttgaatattgac
cgcgttaatgcgcagcaggcgcgccggtttatggatcgcgtggtgggttacatggtatcc
ccgctgctgtggaaaaaaatcgcccgcggcttgtccgctggccgcgtgcagtcggttgcc
gtgcgcctgattgtcgatcgcgaacgcgaaattaaagcattcgtgccggaagaatattgg
gaactgcacgccgatttgctggccggcagcgatattcaactgcaaatgcaggtgacgcac
cataacggcaaaccgtttaagcccgttaataaagcgcaaacacaggccgcggttagcctg
cttgaaaacgcccgctataaggtggccgatcgtgaagataagccgaccagcagtaagccg
agcgcgccattcatcacctctacgctgcaacaggctgccagtacacgtcttggttttggc
gtgaaaaaaaccatgatgatggcacagcgtctgtatgaggcgggctacattacttacatg
cgtaccgactcaacgaacctcagtcaggatgccttgacgatggtgcgtgactatattggc
gacgagttcggcaaacgttatctgcccgaatctgcgaacctttacagtagcaaagaaaac
tctcaggaagcgcacgaagcgattcgtccttccgatgtaggtgtgctggccgatagcctg
aaagatatggaagccgatgcacagaagctgtatcagctgatctggcgccagttcgtcgct
tgtcaaatgacgcctgcgcaatacgattccaccacgttaatcgtggaagccgcagattat
caactgcgtgcgaaaggccgtacgctgcgtttcgatggttggacgaaagtcatgccggcg
ttacgtaaaaatgatgaagatcgcacgttgccaaccgtggcggtgggcgaggcgctgacg
ctgcagaagttgctgccagggcaacacttcactaagccaccggcacgttacagcgatgcc
tcactggttaaagaactggagaaacgcggcattggccgtccgtctacctacgcatctatt
atctcaaccattcaggatcgcggctacgttcgagtagagaaccgtcgtttctacgccgag
aagatgggcgaaatcgttaccgatcgattggaagaaaacttccgcgaattgatgaattac
gatttcaccgcgcggatggaaagtcgtctcgatcaggttgccaataatcaggcggaatgg
aaagccgtgctggatgagtttttcaatgaattcagtcagcagttggaaaaggcggaacag
gatccggaagaaggcggcatgcgccctaatgcgatggtgttgaccagcattgactgccca
acctgttcccgccaaatggggattcgtaccgccagcacgggagtgttcctgggctgctcc
ggttacgccctgtcgccgaaagagcgctgcaaaactacgatcaacctgatcccagaaaac
gaagtgctgaatgtgttggaaggcgatgatgctgaaaccaacgcgctgcgcgcccgtcgc
cgctgtgaaaaatgtggtacggcgatggacagctacctgattgataatcagcgtaagctg
cacgtttgtggtaataatccagcctgtgacgggtatgagatcgaaactggtgagttccgc
atcaaaggctatgatggcccaattgttgagtgcgagaagtgtggttccgagatgcatctc
aaaatgggacgcttcggtaaatacatggcgtgtaccaacgagagctgtggaaatacacgt
aagatcctgcgcaatggcgaagttgcgccgccgaaggaagatccggtgccgttgcctgag
ttgccctgtgagaagtccgacgcctatttcgtcctgcgtgacggcgcggcaggcgttttc
cttgcagcgaatacgttcccgaaatcgcgtgaaacgcgagcaccactggtagaagaattg
gtgcgcttcaaagatcgtttgccggaaaagctgcgctatttggcggaagcaccagcggtt
gataaagacggcaataagacgcaggtgcgtttcagccgtaagaccaaacagcaatatgtc
tcgtcagaaaaagatggcaaggcaacaggttggtcagcgttttacattgatggcaaatgg
gttgaagggaagaagtaa
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