Pectobacterium sinaloense: ACSJGL_15090
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Entry
ACSJGL_15090 CDS
T11740
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psia Pectobacterium sinaloense
Pathway
psia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACSJGL_15090 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psia03019
]
ACSJGL_15090 (pnp)
03016 Transfer RNA biogenesis [BR:
psia03016
]
ACSJGL_15090 (pnp)
Enzymes [BR:
psia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACSJGL_15090 (pnp)
Messenger RNA biogenesis [BR:
psia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACSJGL_15090 (pnp)
Transfer RNA biogenesis [BR:
psia03016
]
Prokaryotic type
tRNA degradation factors
ACSJGL_15090 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_PDCD11
KH_2
S1_RRP5
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
S1_TP0910
UPF0181
Motif
Other DBs
NCBI-ProteinID:
XXR10179
LinkDB
All DBs
Position
complement(3324986..3327106)
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKNAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFSGPIGAARVGYLNDQYVLNPTTDELKESRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPKWDWHAPEVNV
SLEQRVQVLSEARLGDAYRITEKQERYAQVDVIKADVEAALLAEDDTLNAGEIQEILGNV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQTIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKASE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTARGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAQTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagtttcaatatggtcagcataccgttacgttagaaacc
ggtatgatggcacgccaagctaccgccgctgtgatggtaagcatggatgacaccgcggta
ttcgttactgtggtcggcgcgaaaaacgccaaacccggccaaagtttcttcccattaacg
gttaactatcaggagcgtacctacgctgctggacgtttcccaggtggttttttccgccgc
gaaggccgtccaagcgaaggggaaacgctgatttctcgcttgatcgaccgtccaatccgc
cctctgttcccagaaggtttcctgaatgaagttcaggtgattgcgaccgtggtttccgtt
aacccacaggttaaccctgacatcgttgccatgattggtgcctctgcggcgctgagcctg
tccggtatcccgttcagcggtcctatcggcgcggcgcgcgttggttacctgaacgatcag
tatgttctgaacccaacgacagatgagctgaaagaaagccgtctggatctggtggttgca
ggtacagaaggcgcggttctgatggtggaatccgaagccgacttgctgagtgaagatcag
atgctgggcgcagtggtatttggtcacgatcaacaacaggttgtgattgaaaacattaac
gctctggttgctgaagcaggcaaaccgaagtgggactggcatgcgccagaagtgaatgtt
tctttagagcagcgcgtacaggttctgtctgaagcacgtttgggtgacgcttaccgcatc
actgaaaaacaagagcgttatgcacaggttgacgtcatcaaagctgacgttgaagccgcg
ctgctggcagaagatgacacgctgaacgcgggtgaaatccaggaaatcctgggcaacgtc
gagaaaaacgttgtgcgtagccgcgtactggctggcgaaccgcgtatcgatggccgtgaa
aaagatatgattcgtggtctggatgtgcgtactggcgtacttccacgtactcacggttca
gcgctgttcacccgtggtgaaacgcaggcgttggtaaccgctacgctgggtaccgagcgt
gatgcgcaaactatcgacgaactgactggcgaacgtaccgatcgcttcctgctgcactat
aacttccctccgtactctgtgggtgaaaccggtatggttggttcgcctaagcgccgtgaa
atcggtcacggtcgtctggctaagcgcggtgtattggctgtgatgccgaaggcgagcgaa
ttcccgtacaccgtccgtgtagtatctgaaatcacggaatccaacggttcttcttccatg
gcgtctgtctgtggcgcatctctggcactgatggatgcaggtgtaccgatcaaatcagcg
gttgcaggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgtgctgtccgac
attctgggtgacgaagaccacttgggcgatatggacttcaaagttgctggtagccgtgaa
ggtatcaccgcattgcagatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgcgctgaatcaggctaaaggcgcgcgcttgcacattctgggcgtgatggaacaggca
atcagcactgcacgtggcgatatctctgaatttgcaccacgtattcacaccatcaagatc
agcaccgataagatcaaagatgtcatcggtaaaggtggttctgtgattcgtgcgctgacc
gaagaaaccggcaccacgattgaaatcgaagatgatggtactgtgaagattgcttcgacc
gacggtgaaaaagcgaaacatgcgattcgccgtattgaagagatcactgccgaaatcgaa
gttggccgcgtgtatcagggtaaagttacccgcatcgttgattttggtgctttcgttgct
attggtggcggtaaagaaggcctggtgcatatttctcagatcgccgataagcgcgtagag
aaagtgactgactacctgcaaatgggtcaggaagtaccggttaaggttctggaagttgac
cgtcagggccgcgtgcgcttaagcatcaaagaagccactgcgcaaactcaggaagcggca
gccccgtcttctgaggaataa
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