Pengzhenrongella sicca: J4E96_03010
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Entry
J4E96_03010 CDS
T07613
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psic
Pengzhenrongella sicca
Pathway
psic03420
Nucleotide excision repair
psic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4E96_03010
03430 Mismatch repair
J4E96_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psic03400
]
J4E96_03010
Enzymes [BR:
psic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4E96_03010
DNA repair and recombination proteins [BR:
psic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4E96_03010
MMR (mismatch excision repair)
Other MMR factors
J4E96_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QTE30011
UniProt:
A0A8A4ZF25
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All DBs
Position
669880..673215
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AA seq
1111 aa
AA seq
DB search
MTLSARRIADLLGRDAPTPDQVEIIEAPLEPMLVVAGAGSGKTETMAARVVWLIANGLVA
PEQVLGLTFTRKAAGELGDRVRRRLRRLAPHLASSGVLAGYAAGGRAGLDLARPTVATYN
SYAASLVTDHALRLGLEPAARLIGDAGQWQLATDVVETWAQDLDTDAATSTVVQAVLALS
GALAEHLLDPAEAGDQIEDLLEELANVPATPGKVGPYAATAKLLGSLAERRRVLDLVVEY
RRRKRADDVMDFGDQVEIAARLAREVEAVRVSERARFTVVLLDEYQDTSHAQLELLSALF
GAGHPVTAVGDPHQSIYGWRGASAGGLARFPERFPVLDAAGAAQPAPVRYLSTSWRNDRA
ILAAANLVAGPLRTRTDGSAGLVRVPRLEAHPGAGPGEVQARYASTVEEEADAVARFIAD
RWRPAGRGPARVAASTRVTAAVLCRKRSQFDALESALRAAGLPVEVVGLGGLLQTPEVLD
LVATLLVAHDPSRGDALVRLLTGARTRLGIADLHALAAWATELADTRGGPPRPRQATALA
DSEVQERDDVVLEGDVVDERSIVDALDDLPRRGWRSRTGRELTDAAHERLRDLADLLRTL
RSHTYLSLPELVGEAERLLGLDIEVASRPGVSPGRARAQLDAFRDVAVQFSAGADLPTLG
AFLAWIDAAANEERGLDRPVTEPDPDAVQLITVHAAKGLEWDVVAVPGLTDGVLPMTSTA
APGGPKASGWLTGLGVLPYALRGDAADLPALDVAAAVDQKDLERCREQLRRDIGAHEVAE
ERRLAYVALTRARHALLLTGSWWRDRKTPQPASLFLAELVDAGLVATDGWADAPESGAPN
PRTASARTAAWPTDPFGAGPRRAHVQAAAAAVEAERAAELAGQPAPVPSDLTRTARLLLA
ERARVATPDLEVALPAHLSASSVVRLAADPQAFAHGLRRPVPLEPTSAARRGTAFHAWVE
RYFDSASLLDVETLPGADDDADAASGPLADLRAGFLASSWAARTPVAVEVDIETPVAGYV
LRCRIDAVFPTPGGGVVVVDWKTGRPPADAAAARTREIQLAVYRLAWSRWSGLPLERVDA
AFCYVASGETVTPARLLGAGEIEELLVGLTA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtccgcgcgccggatcgccgacctcctcggccgggacgcccccacccccgac
caggtcgagatcatcgaggcgccgctcgagccgatgctcgtagtcgccggggccgggtcc
ggcaagaccgagacgatggccgcgcgcgtcgtctggctgatcgcaaacggcctggtcgcg
cccgagcaggtgctcggcctgacgttcacgcgcaaggccgcgggcgagctcggcgaccgg
gtccgccgccggctgcggcggctcgccccgcacctcgcgagctccggcgtgctcgccggg
tacgccgccggtggccgcgccgggctggacctcgcgcgcccgacggtcgcgacctacaac
tcctacgccgcgtcgctggtgaccgaccacgcgctgcggctcgggctcgagcccgccgcg
cgcctcatcggcgacgccgggcagtggcagctcgcgaccgacgtggtcgagacctgggcg
caggacctcgacacggacgccgcgacgtcgaccgtcgtgcaggccgtgctcgcgctgtcc
ggcgcgctcgccgagcacctgctcgaccccgccgaggccggcgaccagatcgaggacctg
ctcgaggagctggcgaacgtccccgcgacgccgggcaaggtcgggccgtacgcggcgacg
gccaagctgctggggtcgctcgccgagcggcgccgcgtgctcgacctcgtggtggagtac
cgccggcgcaagcgcgccgacgacgtgatggacttcggcgaccaggtcgagatcgccgcg
cggctggcccgcgaggtcgaggcggtccgggtgagcgagcgggcacggttcaccgtcgtg
ctgctcgacgagtaccaggacacctcgcatgcgcagctcgagctgctgtccgcgctgttc
ggcgcgggccaccccgtcaccgccgtcggggacccgcaccagtcgatctacggctggcgg
ggcgcgagcgcgggcgggctcgcgcggttcccggagcggttcccggtgctcgacgccgcc
ggcgcggcccagcccgcgcccgtgcggtacctgtccacctcgtggcgcaacgaccgcgcg
atcctcgccgccgccaacctcgtcgccgggccgctgcgcacgcgcaccgacgggtcggcg
ggcctcgtgcgggtcccgcggcttgaggcgcaccccggggccggcccgggcgaggtccag
gcgcggtatgcgtcgaccgtcgaggaggaggccgacgccgtcgcgcgcttcatcgccgac
cggtggcggcccgcgggccgcgggccggcgcgagtggccgcgtcgacgcgggtgaccgcg
gcggtgctgtgccgcaagcggtcccagttcgacgccctcgagtcggcgctacgcgccgcg
gggctgccggtcgaggtcgtcgggctcggcgggctgctgcagacgcccgaggtgctggac
ctcgtcgcgacgctcctggtcgcgcacgacccgtcccgcggcgacgcgctcgtccggctg
ctgaccggcgcgcggacccggctcgggatcgccgacctgcacgccctcgcggcctgggcg
accgagctcgcggacacgcgcggcggcccgccgcggccgcgccaggcgacggcgctcgcg
gacagcgaggtgcaggagcgcgacgacgtcgtgctcgagggcgacgtcgtcgacgagcgc
agcatcgtcgacgcgctcgacgacctgccccgccgcggctggcggagccggaccgggcgc
gagctcaccgacgccgcccacgagcggctgcgggacctcgcggacctgctgcgcaccctc
cgctcgcacacctacctgtccctgcccgagctcgtcggggaggcggagcggctgctcggc
ctcgacatcgaggtcgcctcccggcccggggtgagccccggccgggcccgcgcgcagctc
gacgcgttccgggacgtcgcggtccagttctcggcgggcgcggacctgccgacgctcggc
gcgttcctggcctggatcgacgccgcggccaacgaggagcgcggcctcgaccggcccgtc
acggagcccgacccggacgccgtccagctcatcacggtgcacgcggccaagggcctcgag
tgggacgtcgtcgcggtgcccgggctcaccgacggcgtgctgcccatgacctcgaccgcc
gcgcccggcgggccgaaggcgagcggctggctcaccggactcggggtgctgccctacgcg
ctgcgcggcgacgcggccgacctgccggcgctggatgtcgcggccgccgtcgaccagaag
gacctcgagcggtgccgcgagcagctgcgccgcgacatcggcgcgcacgaggtcgccgag
gagcggcggctcgcgtacgtcgcgctcacccgcgcccggcacgcgctgctgctgaccggc
tcgtggtggcgcgaccgcaagaccccgcagccggcgtcgctgttcctcgcggagctggtc
gacgccgggctggtcgcgaccgacggctgggcggacgccccggagtccggcgcgccgaac
ccgcgcacggcgtcggcccggaccgcggcctggcccaccgacccgttcggggccgggccg
cggcgcgcgcacgtccaggcggcggccgccgccgtcgaggccgaacgcgccgccgagctc
gcggggcagccggcgcccgtgccgtcggacctgacccgcacggcccggctgctgctcgcc
gagcgcgcccgcgtggccaccccggacctcgaggtcgcgctcccggcgcacctgtcggcg
tcgtcggtggtgcggctcgcggccgacccgcaggcgttcgcacacggcctgcgccgaccc
gtcccgctcgagccgacctcggccgcccggcgaggcaccgccttccacgcgtgggtcgag
cggtacttcgactccgcgtcgctgctcgacgtcgagacgctcccgggcgccgacgacgac
gcggacgccgcgagcggcccgctcgccgacctgcgcgccggtttcctcgcgtcgtcgtgg
gcggcgcgcacgccggtcgcggtcgaggtcgacatcgagacgcccgtcgcggggtacgtg
ctgcgctgccggatcgacgcggtgttcccgaccccgggcggcggcgtcgtcgtcgtggac
tggaagacggggcgcccgcctgccgacgccgccgcggcgcgcacccgcgagatccagctc
gcggtctaccggctcgcctggtcgcgctggtcggggctcccgctcgagcgtgtggacgcg
gccttctgctacgtcgcgtcgggggagaccgtcacgcccgcgcggctgctcggggcgggg
gagatcgaggagctgctggtcgggctgacggcttga
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