Pengzhenrongella sicca: J4E96_06360
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Entry
J4E96_06360 CDS
T07613
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psic
Pengzhenrongella sicca
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psic03016
]
J4E96_06360 (truB)
Enzymes [BR:
psic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4E96_06360 (truB)
Transfer RNA biogenesis [BR:
psic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4E96_06360 (truB)
Prokaryotic type
J4E96_06360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QTE30590
UniProt:
A0A8A4ZF19
LinkDB
All DBs
Position
1408389..1409396
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AA seq
335 aa
AA seq
DB search
MIATPAAESAPRAGRAPRKPRTDRGPRAARRPTAADGLVIVDKPAGWTSHDVVARMRGIA
GTRKVGHAGTLDPMATGVLVLGIGRATKLLTYVVGADKEYTATIRLGVATNTDDAEGEVI
ATVDAAAVTRPAIDAGVAALTGPIEQVPSTVSAIKVDGQRAYARVRAGEQFELAARPVTI
VSFTVHDVRAEELADDGGTAVDVDVTVVCTSGTYIRALARDLGTGLGVGGHLTALRRTRV
GGYPIGLARTLDELEAHPDSTPLEVLPLAAAARATFPVRELTADEATALSYGKRIDAGEP
APSDPIAAIAPDGTLAALLTADGPHARPVLVFAPA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgacgccggccgcggagagcgcgcctcgggcgggcagagcgccccggaagccc
cggacggaccgcggcccgcgcgccgcgcgccgaccgacggccgccgacggcctcgtcatc
gtcgacaagcccgcgggctggaccagccacgacgtcgtcgcgcggatgcgcgggatcgcg
ggcacgcgcaaggtcggccacgcgggcacgctcgacccgatggcgaccggggtgctcgtg
ctcggcatcggccgggcgacgaagctgctcacgtacgtcgtcggcgccgacaaggagtac
accgcgaccatccggctcggcgtcgcgacgaacaccgacgacgccgagggcgaggtcatc
gcgaccgtcgacgccgccgcggtcacccgcccggcgatcgacgcgggagtggccgcgctc
accgggcccatcgagcaggtcccctcgaccgtcagcgcgatcaaggtcgacggccagcgc
gcgtacgcccgcgtgcgcgccggcgagcagttcgagctcgccgcgcgcccggtcacgatc
gtgagcttcaccgtgcacgacgtacgtgccgaggagctcgccgacgacggcggcacggcc
gtcgacgtggacgtcaccgtcgtgtgcacctcgggcacctacatccgcgcgctggcccgc
gacctcggcaccgggctcggcgtcggggggcacctgacggcgttgcggcgcacgcgcgtg
ggcggctacccgatcgggctcgcgcgcacgctggacgagctcgaggcgcaccccgactcg
acgccgctcgaggtgctgccgctcgcggccgcggcgcgcgcgaccttcccggtgcgcgag
ctcaccgccgacgaggcgacggcgttgtcctacggcaagcgcatcgacgcgggcgagccc
gccccgagcgacccgatcgcggccatcgcaccggacggcacgctcgccgcgctgctgacg
gccgacggccctcacgcccgcccggtcctggtcttcgcccccgcctag
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