Pengzhenrongella sicca: J4E96_06820
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Entry
J4E96_06820 CDS
T07613
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psic
Pengzhenrongella sicca
Pathway
psic03030
DNA replication
psic03430
Mismatch repair
psic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4E96_06820 (dnaE)
03430 Mismatch repair
J4E96_06820 (dnaE)
03440 Homologous recombination
J4E96_06820 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psic03032
]
J4E96_06820 (dnaE)
03400 DNA repair and recombination proteins [BR:
psic03400
]
J4E96_06820 (dnaE)
Enzymes [BR:
psic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4E96_06820 (dnaE)
DNA replication proteins [BR:
psic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4E96_06820 (dnaE)
DNA repair and recombination proteins [BR:
psic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4E96_06820 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QTE30668
UniProt:
A0A8A4ZM81
LinkDB
All DBs
Position
1507228..1510770
Genome browser
AA seq
1180 aa
AA seq
DB search
MPSTSNSDFVHLHVHTEYSMLDGAARLDDLFTEATRRGQSAMATTDHGFVFGAFDFWSKA
QAHGIKPIIGVEAYLTPGTARGDRTRVKWGDQFQGSDDVSGGGAYTHLTMWAKDTAGMHN
LFRMASLASLEGQFYKPRMDRELLQTYGAGMIATTGCPSSEVQTRLRLGQFDEAVRAAGE
FQDIFGKENYYVELMDHGLDIERRVAKDLLRVAQAIDAPLVATNDLHYVTKADHKAHEVL
LCVQSGSTLADPKRFKFDAQEFYVKSGEEMRRMWAELPEACDNTLRIAEQCEVTFKTDVD
YMPNFPCPTGENETSWFIKEVETGLHRRYAAGIPADVRKQADYETKVITDLGFPGYFLVV
ADFINWAKAQGIRVGPGRGSAAGSMASYAMGITELDPLEHGLIFERFLNPERISWPDVDV
DFDERRRGEVIRYVTEKYGEEKVAQIVTFGTIKAKQAIKDASRVLGFPFAMGDKLTKAMP
PGVMGKDIPLAGIYDANHPRYAEADEFRRVVQADPDAQRVVETALGLEGLKRQWGVHAAG
VIMSSEPLIEIVPIMRREQDGAIITQFDQPTSEKLGLIKMDFLGLRNLTILDDALENIVM
NGKPAIRVEDLPLDDQPTYDLLGRGDTLGVFQLDGGPMRALLRQLHPDSFEDISAVIALY
RPGPMGMQSHTNYALRKNGLQEVVPIHPELAEPLEEVVGLTHGLIVYQEQVQRAAQKLAG
YSLGQADLLRRAMGKKKQSILDKEFVPFEAGMLERGYSPGAVKAVWDVLVPFAGYAFNKA
HSAAYGVVSYWTGYLKANYPAEYMAALLTSVRDDKDKSALYLGECRHMGNTVLPPDVNSS
SANFTAVGTDIRFGLTAIRNVGANVVDAIVATREAKGAFESFTDFLAKVPAVVCNKRTIE
SLIKAGAFDSLGNTRRALLLVHEQAVESVIGVKRKEAEGQFDLFADFAGGGDDDAGLSFS
VEVPDLPDWDKKQRLAFEREMLGLYVSDHPLRGLEHVLSAAADVSIAVLLADEARPDGST
VTIAGLITSVQRKMSKQGNPWAAVTVEDMEGSVEIMFFGETYLAYSTALAEDQVVIIRGR
VRRRDDSMQLQALEVSLPDVSAVADSPLTVSMSVTRCTPPVVERLREILTNHPGVIEVHL
KLLSPGRATVMRLEESLRVERSSALFGDLKALLGPSCLGS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccacctccaactcggacttcgtgcacctgcacgtgcacaccgagtattcgatg
ctcgacggcgccgcgcgcctcgacgacctgttcaccgaggccacccgccgggggcagtcc
gcgatggcgacgacggaccacgggttcgtgttcggggcgttcgacttctggtccaaggcc
caggcgcacggcatcaagccgatcatcggcgtcgaggcctacctcacccccgggacggcg
cgcggggaccgcacgcgcgtcaagtggggcgaccagttccagggcagcgacgacgtgtcc
ggcggcggcgcgtacacccacctgacgatgtgggcgaaggacaccgccggcatgcacaac
ctgttccggatggcgtccctggcgtccctcgaggggcagttctacaagccccggatggac
cgcgagctgttgcagacctacggcgcgggcatgatcgcgacgaccggctgcccgtcgagc
gaggtgcagacgcgcctgcgcctgggccagttcgacgaggccgtccgcgccgcgggcgag
ttccaggacatcttcggcaaggagaactactacgtcgagctgatggaccacggcctcgac
atcgagcgccgggtcgcgaaggacctgctgcgggtcgcccaggcgatcgacgcgccgctc
gtggcgaccaacgacctgcactacgtgaccaaggccgaccacaaggcgcacgaggtgctg
ctgtgcgtccagtccgggtccacgctcgccgacccgaagcggttcaagttcgacgcgcag
gagttctacgtcaagtccggcgaggagatgcgccggatgtgggccgagctgcccgaggcg
tgcgacaacacgctgcggatcgccgagcagtgcgaggtgacgttcaagaccgacgtcgac
tacatgcccaacttcccgtgccccacgggcgagaacgagacctcctggttcatcaaggag
gtcgagactgggctgcaccggcgctacgccgcgggcatccccgccgacgtgcgcaagcag
gcggactacgagacgaaggtcatcaccgacctcggcttcccggggtacttcctcgtcgtg
gccgacttcatcaactgggcgaaggcccagggcatccgcgtggggcccggccgcggctcg
gcggccggctcgatggcctcctacgcgatgggcatcaccgagctcgacccgctcgagcac
ggtctgatcttcgagcggttcctcaaccccgagcgcatctcgtggcccgacgtcgacgtc
gacttcgacgagcgccgccgcggcgaggtgatccggtacgtcacggagaagtacggcgag
gagaaggtcgcgcagatcgtcaccttcgggacgatcaaggccaagcaggcgatcaaggac
gcgtcccgcgtgctcggcttcccgttcgcgatgggggacaagctcaccaaggcgatgccg
ccgggcgtcatgggcaaggacatcccgctcgccgggatctacgacgcgaaccacccgcgc
tacgccgaggccgacgagttccgccgggtcgtccaggccgaccccgacgcgcagcgggtc
gtcgagaccgcgctcgggctcgagggcctcaagcgccagtggggcgtgcacgcggccggc
gtcatcatgtcgagcgagccgctgatcgagatcgtcccgatcatgcgccgcgagcaggac
ggcgcgatcatcacccagttcgaccagcccacctccgagaagctcgggctgatcaagatg
gacttcctcggcctgcgcaacctcacgatccttgacgacgcgctcgagaacatcgtcatg
aacggcaagcccgcgatccgggtcgaggacctcccgctcgacgaccagcccacctacgac
ctgctcgggcggggcgacacgctcggcgtcttccagctcgacggcggcccgatgcgcgcg
ctgctgcgccagctgcaccccgacagcttcgaggacatctcggccgtcatcgcgctgtac
cggccgggcccgatgggcatgcagtcgcacacgaactacgcgctgcgcaagaacgggctg
caggaggtcgtgccgatccaccccgagctggccgagccgctcgaggaggtcgtcgggctg
acccacgggctgatcgtctaccaggagcaggtccagcgcgccgcgcagaagctcgccggg
tactcgctcggccaggccgacctcctccggcgcgcgatgggcaagaagaagcagtcgatc
ctcgacaaggagttcgtgcccttcgaggcggggatgctcgagcgcggctactcgcccggg
gccgtcaaggcggtctgggacgtgctggtgccgttcgcggggtacgccttcaacaaggcg
cactcggccgcgtacggcgtcgtctcgtactggaccggctacctcaaggcgaactacccg
gccgagtacatggccgcgctgctgacgtccgtgcgcgacgacaaggacaagtcggcgctc
tacctcggcgagtgccggcacatgggcaacaccgtgctgccgcccgacgtgaactcgtcg
tcggcgaacttcacggccgttggcaccgacatccggttcgggctcaccgcgatccgcaac
gtcggcgcgaacgtcgtcgacgcgatcgtcgcgacccgcgaggccaagggcgcgttcgag
tcgttcaccgacttcctcgcgaaggtgcccgcggtggtctgcaacaagcgcaccatcgag
tcgctcatcaaggcgggagcgttcgactcgctcggcaacacccgccgcgcgctgctgctc
gtgcacgagcaggccgtcgagtccgtcatcggggtcaagcgcaaggaggcggagggccag
ttcgacctgttcgccgacttcgcgggcggcggcgacgacgacgccgggctctcgttcagc
gtcgaggtccccgacctgcccgactgggacaagaagcagcggctcgcgttcgagcgcgag
atgctcgggctgtacgtctcggaccacccgctgcgcgggctcgagcacgtgctctcggcc
gccgccgacgtgtcgatcgccgtgctgctcgccgacgaggcacgcccggacggctcgacg
gtcacgatcgccgggctcatcacgtccgtgcagcgcaagatgtcgaagcagggcaacccc
tgggccgcggtcacggtcgaggacatggagggctcggtcgagatcatgttcttcggcgag
acctacctcgcctactcgacggcgctcgccgaggaccaggtcgtgatcatccggggccgc
gtgcgccggcgggacgactcgatgcagctgcaggccctcgaggtgtcgctgcccgacgtc
tccgcggtcgccgactccccgctcacggtgtcgatgtcggtcacccggtgcaccccgccg
gtggtcgagcggctccgggagatcctcacgaaccacccgggcgtgatcgaggtgcacctg
aagctgctgagcccgggccgcgcgaccgtgatgcggctcgaggagagcctgcgggtcgag
cggtcctcggcgctgttcggcgacctcaaggcgctgctcggtccgagctgcctggggtcg
tag
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