Pengzhenrongella sicca: J4E96_06850
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Entry
J4E96_06850 CDS
T07613
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psic
Pengzhenrongella sicca
Pathway
psic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J4E96_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psic03019
]
J4E96_06850
03400 DNA repair and recombination proteins [BR:
psic03400
]
J4E96_06850
Enzymes [BR:
psic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4E96_06850
Messenger RNA biogenesis [BR:
psic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4E96_06850
DNA repair and recombination proteins [BR:
psic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4E96_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Cas3-like_C_2
NAT_N
Motif
Other DBs
NCBI-ProteinID:
QTE30673
UniProt:
A0A8A4ZI55
LinkDB
All DBs
Position
complement(1517818..1519959)
Genome browser
AA seq
713 aa
AA seq
DB search
MSLPEVLDRAALHGQAQAALVALVGRPDATLRTDQWTAIEALVADRRRALVVQRTGWGKS
AVYFVATALLRAAGAGPTVIISPLLALMRNQVDAAQRAGIRAETINSANVGDWAGVQARV
AAGEVDVLLVSPERLNNPGFRDEVLPQLAATAGLVVIDEAHCISDWGHDFRPDYRRIRTL
LTELPAGIPVLATTATANTRVTSDVAEQLAVTEQGADADVLVLRGSLDRESLHLAVRELP
GTAAQLAWLAHNLPQIDGSGIVYCLTVAAAQQVAEYLRAAGLQVRAYTGQTDTAEREVAE
QDLLANRVKALIATSALGMGFDKGDLAFVVHLGAPASPIAYYQQVGRAGRATERAEVVLL
PGREDRAIWDYFASMAFPPEAEVRATLAALEGAGTLSTAALETRVSLRRNRLELMLKVLD
VDGAVQRVRGGWRSTGQEWTYDADRYARVAATRRAEQQAMVDYVRGDECRMAFLRGALDD
PDLPPGWRCGRCDVCGGATAGAAPDAGEIEAARERLAVPGVEVEPRRQWPAGMAGLGVEL
TGKIAPAERAETGRALARLDGIGWGGLLRDLFAGADSGLPVPLRNPVLEVLGAWQPDPAP
AGIVVVASQTRPELVEHLAAGIARRLGIPIVGTVRPAARLGPGRHDVNSAQRLAGIARRL
ELDLSPEAAEGLAGRAVLLVDDRTDSGWTLAVGARLLRRAGASAVYPFVLGVG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcccgaagttctcgaccgcgccgcgctgcacgggcaggcgcaggccgcgctc
gtcgcgctcgtcggccgccccgacgcgacgctgcgcaccgaccagtggaccgcgatcgag
gcgctcgtggccgaccggcgccgggccctcgtcgtgcagcgcaccggctggggcaagtcc
gcggtgtacttcgtggccaccgcgttgctacgggccgccggcgcgggcccgaccgtgatc
atctcgccgctgctcgccctcatgcgcaaccaggtcgacgccgcccagcgcgccgggatc
cgcgccgagaccatcaactcggccaacgtcggggactgggccggcgtgcaggcccgcgtc
gcggcgggcgaggtcgacgtgctcctcgtctcgcccgagcggctgaacaacccgggcttc
cgcgacgaggtcctgccgcagctcgccgcgacggcggggctcgtcgtcatcgacgaggcg
cactgcatctccgactggggccacgacttccggccggactaccggcgcatccgcaccctg
ctcaccgagctgcccgccggcatccccgtgctcgcgaccacggcgacggccaacacgcgg
gtgacctccgacgtcgccgagcagctcgcggtgaccgagcagggcgccgacgccgacgtg
ctcgtgctgcgcggctcgctcgaccgcgagagcctgcacctggccgtgcgcgagctgccg
ggcaccgccgcgcagctcgcctggctcgcgcacaaccttccccagatcgacggctcgggc
atcgtctactgcctgaccgtcgcggcggcgcagcaggtcgccgagtacctgcgggccgcc
gggctgcaggtgcgcgcgtacaccgggcagaccgacaccgccgagcgcgaggtcgctgag
caggacctcctggccaaccgcgtcaaggcgctgatcgcgacgtcggcgctcgggatgggc
ttcgacaagggcgacctcgcgttcgtggtccacctcggcgcgcccgcctccccgatcgcg
tactaccagcaggtcggccgcgcgggccgcgcgaccgagcgcgccgaggtcgtgctgctg
cccggccgcgaggaccgcgcgatctgggactacttcgcgtccatggcgttcccgcccgag
gccgaggtgcgcgcgacgctcgcggcgctggagggggccggcacgctctcgaccgccgcc
ctcgagacccgggtctcgctgcggcgcaaccgcctcgagctcatgctcaaggtcctggac
gtcgacggggcggtccagcgggtgcgcggcggctggcgctcgaccgggcaggagtggacg
tacgacgcggaccggtacgcgcgcgtcgcggccacccgccgcgccgagcagcaggcgatg
gtcgactacgtgcgcggcgacgagtgccggatggcgttcctgcgcggcgcgctcgacgac
cccgatctcccgcccggctggcgctgcgggcgctgcgacgtgtgcggcggcgcgacggcg
ggcgcggccccggacgcgggcgagatcgaggcggcccgggaacggctcgccgtcccgggc
gtcgaggtcgagccgcggcggcagtggcccgccggcatggccggcctcggcgtggagctc
acgggcaagatcgccccggccgagcgcgccgagacggggcgggcgctcgcgcgcctggac
ggcatcggctggggcggcctgctccgcgacctgttcgcgggcgccgacagcgggctaccg
gtccccctgcgcaacccggtgctcgaggtgctcggcgcctggcagccggacccggccccc
gcggggatcgtcgtcgtcgcgtcccagacccggcccgagctcgtcgagcacctcgcggcg
ggcatcgcgcgccggctcgggatcccgatcgtcgggaccgtccgcccggccgcgcgcctc
gggcccgggcggcacgacgtcaactcggcgcagcgcctggccggcatcgcgcgccgcctc
gagctcgacctgtcgcccgaggcagccgagggcctcgcgggccgcgccgtcctgctcgtg
gacgaccggaccgactccggatggacgctcgccgtcggcgcgcgcctgctgcgccgcgcg
ggcgcgagcgcggtctacccgtttgtcctcggggtcggctga
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