KEGG   Pengzhenrongella sicca: J4E96_09500
Entry
J4E96_09500       CDS       T07613                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
psic  Pengzhenrongella sicca
Pathway
psic03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    J4E96_09500 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psic03400]
    J4E96_09500 (uvrA)
DNA repair and recombination proteins [BR:psic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     J4E96_09500 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      J4E96_09500 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_21 AAA_23 RsgA_GTPase AAA_16 nSTAND1 AAA_33 AAA_25 AAA_22 nSTAND3 NACHT ScfRs ATPase MMR_HSR1 cobW Viral_helicase1 MeaB Septin NTPase_1 HTH_5 DUF87 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: QTE31128
UniProt: A0A8A4ZNK1
LinkDB
Position
2075795..2078776
AA seq 993 aa
MNDRLIVQGAREHNLRNVDLDLPRDQLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFARAGTQF
CPVCGEQVSKQTPQQIVDRLLELPEGTRYQVLAPVVRGRKGEYSELFKELQAKGFARARV
DGAVVQLTEPPLLEKKLKHDIEVVIDRLAAKEGVRRRLTDSVETALGLAGGLLVVELVDA
DIDDPERERRFSEHRACPNDHQLALEEIEPRTFSFNAPYGACPECTGIGSRLEVDAELVI
PDEDLSLADGAVAPWAQISSEYFARVLAALSSDLGFSMDVPWRALPQRAKDAVLHGENHE
VKVKYKNRWGRERQYSTGFEGVITFLERRHGETDSEWSKEKYEAFMREVPCPVCQGARLK
PEVLAVRIGGSSIAQVCALPIREARDFLDTLVLGEREQAIAAQVLKEIQARLGFLLDVGL
DYLSLERPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLR
DLGNTLIVVEHDEDTIRSADWIVDIGPGAGEHGGRVVHSGDLAGLLAAQESVTGAYLSGR
RSIPMPAERRAIDRDRMLTVVGAREHNLTGIDVSFPLGTLVAITGVSGSGKSTLVNSILY
TVLANELNGARQVAGRHKRVTGLEHLDKVVHVDQGPIGRTPRSNPATYTGVWDHVRRLFA
ETTEAKVRGYAPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHSARYNRETL
EVHFKGKTVADVLHMPIEEAAEFFAAVPAISRHLRTLVDVGLGYVRLGQPAPTLSGGEAQ
RVKLAAELQKRSTGRTIYVLDEPTTGLHFEDIRKLLGVLQSLVDKGNSVLVIEHNLDVIK
NADWVIDMGPEGGSGGGKVIAEGTPEHVAGVKASHTGRYLAPVLLAEAPVAPPSSAKGAG
RNGVAPAVLPAGKAPNRKAPARSAKARAAAKAS
NT seq 2982 nt   +upstreamnt  +downstreamnt
gtgaacgaccgactcatcgtccagggcgcccgcgagcacaatctccgtaacgtcgacctc
gatcttccgcgcgaccagctcatcgtgttcacgggactgtcgggctccggcaagtcgtcg
ctcgccttcgacacgatcttcgccgagggccagcgccgctacgtcgagtcgctctcggcg
tacgcgcgccagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctg
tcgccggccgtgtcgatcgaccagaagtcgacgaaccggaacccgcgctcgaccgtcggc
acgatcaccgaggtgtacgactacctgcggctgctgttcgcgcgcgccgggacgcagttc
tgccccgtgtgcggggagcaggtcagcaagcagaccccccagcagatcgtggaccggctg
ctcgagctgccagagggcacgcgctaccaggtgctcgcgcccgtcgtgcgcggccgcaag
ggcgagtactccgagctgttcaaggagctgcaggccaagggcttcgcgcgcgcgcgggtc
gacggcgcggtcgtccagctcaccgagccgccgctgctcgagaagaagctcaagcacgac
atcgaggtggtcatcgaccgcctcgccgcgaaggagggcgtgcgccggcgcctgaccgac
tcggtcgagaccgcgctcgggctggcgggcgggctgctggtcgtcgagctggtggacgcc
gacatcgacgaccccgagcgtgagcgccggttctccgagcaccgcgcctgcccgaacgac
caccagctcgcgctcgaggagatcgagccgcgcacgttctcgttcaacgcgccctacggc
gcgtgccccgagtgcaccggcatcggcagccggctcgaggtcgacgccgagctcgtcatc
ccggacgaggacctgtcgctggccgacggcgcggtcgcgccctgggcgcagatctcgtcc
gagtacttcgctcgcgtgctcgcggcgctgtcgagcgacctcgggttctcgatggacgtg
ccgtggcgcgcgctgccgcagcgcgcgaaggacgcggtgctgcacggcgagaaccacgag
gtcaaggtcaagtacaagaaccggtggggccgcgagcggcagtactcgaccgggttcgag
ggcgtcatcacgttcctcgagcgccggcacggcgagaccgactcggagtggagcaaggag
aagtacgaggccttcatgcgcgaggtcccgtgcccggtgtgccagggcgcgcggctcaag
cccgaggtgctcgccgtgcgcatcggcgggtcgtcgatcgcgcaggtctgcgcgctcccg
atccgcgaggcccgcgacttcctcgacaccctcgtgctcggcgagcgcgagcaggcgatc
gccgcgcaggtgctcaaggagatccaggcccggctgggcttcttgctcgacgtcggcctc
gactacctctcgctcgagcggcccgcgggcaccctctcgggcggcgaggcgcagcggatc
cggctcgccacccagatcggctccggcctcgtcggcgtgctctacgtgctcgacgagccg
agcatcgggctgcaccagcgggacaaccgccgcctcatcgagacgctcacgcggctgcgg
gacctgggcaacacgctgatcgtcgtcgagcacgacgaggacacgatccggtcggccgac
tggatcgtcgacatcgggccgggcgcgggcgagcacggcggccgcgtcgtgcactcgggt
gacctcgcggggctgctcgcggcgcaggagtccgtgacgggcgcgtacctgtcggggcgc
cgatccatcccgatgcccgccgagcgccgggcgatcgaccgggaccggatgctgacggtc
gtcggcgcgcgcgagcacaacctgacgggcatcgacgtgtcgttcccgctcgggacgctc
gtcgcgatcaccggcgtgtccggctcgggcaagtcgacactcgtcaattcgatcctctac
accgtgctcgcgaacgagctcaacggcgcgcggcaggtcgccggccggcacaagcgggtc
accggcctcgagcacctcgacaaggtcgtgcacgtggaccagggcccgatcggccgcacg
ccccggtccaaccccgcgacctacaccggggtgtgggaccacgtccggcgcctgtttgcc
gagacgaccgaggcgaaggtgcgcgggtacgcgcccgggcggttctcgttcaacgtcaag
ggcggccgctgcgaggcctgctcgggcgacgggacgctcaagatcgagatgaacttcctg
cccgacgtctacgtgccgtgcgaggtgtgccactccgcccggtacaaccgggagaccctc
gaggtgcacttcaagggcaagacggtggccgacgtgctgcacatgccgatcgaggaggcc
gcggagttcttcgccgccgtgccggcgatctcgcggcacctgcgcacgctcgtcgacgtc
ggcctcgggtacgtacggctcggccagcccgcgccgacgctctcgggcggcgaggcgcag
cgcgtcaagctcgcggccgagctgcagaagcgctcgaccggccggacgatctacgtgctc
gacgagcccacgaccggcctgcacttcgaggacatccgcaagctgctcggggtgctccag
tcgctggtcgacaagggcaacagcgtgctggtcatcgagcacaacctcgacgtcatcaag
aacgcggactgggtcatcgatatggggcccgagggcggcagcggcggcggcaaggtcatc
gcggaggggacgcccgagcacgtggccggcgtcaaggccagccacaccgggcgctacctc
gcgcccgtgctgctggccgaggctccggtcgcgccgccgtcgtcggcgaagggcgccggc
cgcaacggcgtcgctccggccgtcctcccggcaggcaaggcgccgaatcgcaaggccccg
gcgcggagcgcgaaggctcgcgcggcggccaaggccagctga

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