Pengzhenrongella sicca: J4E96_16440
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Entry
J4E96_16440 CDS
T07613
Name
(GenBank) PKD domain-containing protein
Organism
psic
Pengzhenrongella sicca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
K319L-like_PKD
Laminin_G_3
Bact_surface_Ig-like
Laminin_G_2
InlK_D3
Rax2
Big_13
Laminin_G_1
DUF5122
Big_9
Motif
Other DBs
NCBI-ProteinID:
QTE28896
UniProt:
A0A8A4ZEC5
LinkDB
All DBs
Position
complement(3593478..3598409)
Genome browser
AA seq
1643 aa
AA seq
DB search
MRSLRAAAARVVATSAAAALLIAGLTVAGPLSQAAADTAPTDAGTPSTVSATSLPTVQVN
GVVWSQVIVGGTVYVAGDFTTARPAGAAAGVSTVGRANLLAYDLDSGVLIDTWAPVLNGP
AYTITASLDGTRLYVGGDFTYVNGSPQNRIVVLDRATGLRVPGFTVGANAAVRAIVSTPS
TIYFAGNFNTVTGATRNRLAAMSSTTGALLSWAVSAQSLQVDALVLSPDNSRLIVGGRFT
MLGGIPALGSGAVSTTTAAVLPWAANSVIKNWGAGAGIQSLQTDGTLIYGTGFAYIKDAT
SAGNLEGTFAADPNTGEIEWVEDCRGDTYSVFANPGGSSVYVVGHIHNCQNIGAYPESNW
KHGLAFSKQAVSTITPSTSSSYYNWAGYRAPAQLAYYPDFTVGSYTGQGQATWQVTGNAD
YVLYGGEFPTVNGSGQQGLARMAVSAKSTNVLPLKLSSTAMAPAALSRAAGTAQVSWQTN
WDQDNETLTYDVYRDNETTPIYSVKANSLPWQLPRVSFSDSGLANGSAHTYKVTASDPFG
NSVTSSTVSVTVAGASAGPLSTYAAEILGDNPAAYWRLAENSGQTADLTAWGSASVGSGV
TRAVTGALTGDSNRAARFTGSSTSRAAATKSAVGSNRFSVEAWFTTTSTTGGKIVGFGSS
SGTSNSSSNDRHVYMRADGTLTFGVYPGEVRTVTTPASYNDGQWHHVVATLGADGMKLYV
DGAERAADATTISAQPYTGYWRIGGDALSSTWPGAAGENFVGDIDDVAVYGRALPASQVA
IHYGTGQSGAIPNLPPTAAFTADPGVLTASFDASASTDFEGPIAGYAWDFGDGQSGTGVS
ATHAYDVGGTYTVTLTVTDSGGTTNATSQQVVVRAPNVLPVASFTATNTDLTAAFDATSS
TDSDGTIPTYAWTFGDGSTGTGATTTHTYAAAGTYPVTLTVTDNDGGSDGADGEVTVTAP
TAGVVASDAFGRTVSNGFGSADLGGAWATTSGVTSVASGTGRLQLGAASSTVSARLPGVS
GTQLTTRVTESWSKRPNGSGGWLLVRGRITTGGEYRLRVGHTFSGAVTARLVRTTAAGVE
TSITTDLTVPGLTYTTGTTLKAAFEVTGTSPTTLRAKVWVGSGVEPAGWLIEATDTTAAL
QAAGHTGVAALLSSSTTNGPVTVQVDNFTVDGPFSTTNVSPVASFTAATTGLTADVDAAA
SSDPDGTIAGYAWSFGDGSTGTGATASHTYATAGTFTITLTVTDSGGATATTTRQVSVEP
VNQVPIASFTAASSLLTADVDATGSSDPDGTIAGYAWSFGDGGTATGATASHAYTAGGTY
TITLTVTDNSGATATTTRDVTVALANVPPTASFTATATGLSAAVDAAGSSDPDGTISSYA
WTFGDGATATGVTASHDYASTGTYTVTLTVTDSDGATATTTRDLSVAPVPTALATDAFGR
TVASGLGDADLGGAWTATAGATSVSGGAGRLALSGVNVTASARLPGISGTTLTTRVVESW
DKRPAGSGGWFLLRGRITTGGEYRLRINHRSNGVVTARVMRTNSAGTETAITTELTVPGV
TYAAGTGVTLLFEVSTTTTTSLRAKVWATGTSEPAAWLISATDSTAALQGSGHTGVAALT
SSTATNAPITVSIDDYTVTQPAP
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcctccgtgccgccgccgcacgagtggtggcgacctccgccgccgccgcgctg
ctgatcgctggactgaccgtcgcggggccgctctcgcaggccgccgcggacaccgccccc
accgacgccgggacgccgtcgacggtctccgcgacgtcgctcccgaccgtgcaggtcaac
ggcgtcgtgtggtcgcaggtgatcgtcggcggcaccgtctacgtcgccggcgacttcacc
acggcacgccccgccggggcggccgccggggtgtcgaccgtgggccgggcaaacctgctc
gcgtacgacctggacagcggcgtgctgatcgacacgtgggcgcccgtgctcaacgggccc
gcctacacgatcacggcctccctggacgggacccggctgtacgtcggcggcgacttcacc
tacgtcaacggctcgccccagaaccgcatcgtcgtgctcgaccgggcgaccggcctgcgc
gtgcctggcttcacggtcggggccaacgccgccgtccgggccatcgtgtccacgcccagc
accatctacttcgcggggaacttcaacacggtcacgggcgccacccgcaaccggctcgcg
gccatgagctcgaccaccggcgcgctgctgtcctgggccgtctcggcgcagtcgctccag
gtcgacgcgctcgtgctcagcccggacaacagcaggctgatcgtgggcggccgcttcacg
atgctcggcgggatcccggcactcgggtcgggcgccgtgtcgacgaccacggccgcggtg
ctgccgtgggccgcgaactcggtgatcaagaactggggcgccggcgcgggcatccagtct
ctccagaccgacggcaccctcatctacggcaccgggttcgcctacatcaaggacgccacg
agcgcggggaacctcgagggcacgttcgcggccgacccgaacaccggcgagatcgagtgg
gtcgaggactgccgcggcgacacgtactcggtgttcgccaaccccggcggctcgagcgtg
tacgtcgtcgggcacatccacaactgccagaacatcggggcctaccccgagtcgaactgg
aagcacggtctggcgttctccaagcaggcggtctcgacgatcacgccgagcacgagctcc
tcgtactacaactgggcgggctaccgggccccggcccagctcgcctactacccggacttc
accgtcggctcctacacgggccagggccaggcgacctggcaggtcacggggaacgccgac
tacgtcctgtacggcggcgagttcccgaccgtgaacggctccggccagcagggcctggcc
cgcatggccgtgagcgcgaagtccaccaacgtcctgccgctcaagctcagcagcaccgct
atggctccggcggcgctgtcccgggccgcgggcaccgcgcaggtgtcctggcagaccaac
tgggaccaggacaacgagaccctcacctacgacgtgtaccgcgacaacgagacgacgccg
atctactcggtcaaggccaactcgctgccgtggcagctgccgcgggtgtccttctcggac
tccgggctcgccaacggcagcgcccacacctacaaggtgacggcgtccgacccgttcggc
aactccgtgacgtcctcgaccgtgagcgtcaccgtcgccggggcgagcgccggcccgctg
agcacctacgcggccgagatcctcggcgacaaccccgccgcgtactggcggctcgccgag
aactcgggccagacggcagacctgaccgcctggggcagcgcgtccgtgggctcgggggtg
acgcgcgcggtgaccggcgcgctcaccggcgacagcaaccgggccgcacggttcaccggc
tcgtcgacgtcgcgcgcggccgcgacaaagtccgccgtcggctccaaccgcttctcggtc
gaggcgtggttcacgaccacctcgaccaccggcggcaagatcgtcggcttcggcagctcg
tccggcacctcgaacagctcgagcaacgaccggcacgtgtacatgcgcgccgacggcacg
ctgacgttcggggtgtacccgggcgaggtccgcacggtcaccacgcccgccagctacaac
gacgggcagtggcaccacgtcgtcgcgacgctcggcgccgacggtatgaagctctacgtc
gacggcgccgagcgcgccgcggacgcgaccacgatcagcgcgcagccctacacgggctac
tggcgcatcggcggcgacgcgctgtcgtcgacctggccgggggccgcgggggagaacttc
gtcggcgacatcgacgacgtcgccgtctacggccgcgcgctgcccgccagccaggtggcc
atccactacgggacgggccagtcgggcgcgatcccgaacctgccgcccaccgcggcattc
accgccgaccccggagtgctcaccgcgagcttcgacgcgtctgcctcgacggacttcgag
ggcccgatcgcgggctacgcgtgggacttcggcgacgggcagagcggcaccggcgtgagc
gcgacgcacgcctacgacgtgggcggcacgtacaccgtcacgctcaccgtgacggactcg
ggcggtaccaccaacgcaacctcgcagcaggtcgtcgtccgggcgcccaacgtcctgccc
gtcgcgagcttcacggcgaccaacacagacctgaccgcggccttcgacgcgacgagcagc
accgactccgacggcacgatcccgacgtacgcgtggaccttcggtgacggctcgaccggt
acgggcgccacgacgacgcacacgtacgcggccgcgggcacctacccggtcaccctgacc
gtcacggacaacgacggcggctccgacggcgccgacggcgaagtcaccgtcaccgcgccc
accgcgggtgtcgtggcgtccgacgcgttcggccgcacggtctcgaacggcttcggctcc
gccgacctcggcggggcctgggccacgacgtcgggcgtgacaagcgtcgcgtcgggcacc
ggccggctccagctcggcgcggcgagctcgaccgtgagcgcgcgcctgcccggcgtctcg
gggactcagctgaccacccgcgtgacggagagctggagcaagcgcccgaacggctcgggc
ggctggctgctggtgcgcggccggatcacgaccggcggcgagtatcggctccgggtgggc
cacaccttcagcggggcggtcaccgcgcgcctggtgcgcacgacggccgccggggtcgag
acgtccatcacgacggacctgacggtccccggcctgacgtacacgacgggcaccacgctc
aaggccgcgttcgaggtcaccgggacgtccccgaccacgctgcgcgccaaggtctgggtc
ggctccggcgtcgagccggcgggctggctcatcgaggcgaccgacaccacggccgccctg
caggccgctggccacaccggcgtcgcggcgctgctgtccagctcgacgaccaacgggccg
gtgacggtccaggtcgacaacttcaccgtggacggcccgttcagcacgaccaacgtctcg
ccggtcgcgtcgttcaccgccgcgacgacgggtctgacggccgacgtcgacgccgcggcc
agctccgacccggacgggacgatcgcggggtacgcgtggtcgttcggcgacggcagcacc
gggacgggtgcgacggcgtcgcacacctacgcgacggcggggacgttcaccatcacgctc
acggtgaccgacagcggtggtgcgacggcgaccacgacgcggcaggtgtcggtcgagccg
gtgaaccaggtgcccatcgcgagcttcacggccgcgtcgtcgctcctgacggccgacgtc
gacgccacgggcagctccgacccggacgggacgatcgcggggtacgcctggtcgttcggc
gacggcggcaccgcgaccggcgccacggcgtcgcacgcctacacggccggggggacctac
acgatcaccctcaccgtgaccgacaacagcggcgcgacggcgaccacgacccgcgacgtc
acggtcgcgctggcgaacgtcccgccgaccgcgagcttcaccgccacggcgacggggctg
tcggccgcggtcgacgccgccggcagctccgacccggacgggacgatctcctcgtacgcg
tggaccttcggtgacggcgcgaccgcgaccggggtgacggcgtcgcacgactacgcgagc
accggcacctacaccgtgaccctgaccgtgaccgactcggacggcgcgacggcgaccacg
acccgcgacctgtccgtcgctccggtgccgaccgcgctcgccaccgacgcgttcggccgg
acggtcgcctcgggtctcggcgacgccgacctcggcggcgcgtggacggcgacggcgggc
gcgacgagcgtgtccggcggcgccgggcggctcgcgctctcgggggtcaacgtcactgcg
agcgcgcgactcccggggatctcgggcaccaccctgaccacccgggtggtcgagagctgg
gacaagcggccggcgggctcgggcgggtggttcctgctgcggggtcgcatcacgaccggc
ggagagtaccggctcaggatcaaccaccggtccaacggcgtcgtgacggcgcgcgtgatg
cggaccaactcggccggcacggagaccgcgatcacgaccgagctgaccgtgccgggcgtg
acctacgccgccggcacgggggtgacgctgctgttcgaggtgtcgacgaccacgacgacg
tcgctgcgggccaaggtctgggccaccggaacgagcgagccggcggcctggctgatctcg
gcgaccgactcgacggccgcgctgcaggggagcggccacaccggtgtcgcggcgctcacc
tcgagcacggccaccaacgcgccgatcacggtgtcgatcgacgactacacggtcacgcag
cccgcgccctga
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