Pengzhenrongella sicca: J4E96_17580
Help
Entry
J4E96_17580 CDS
T07613
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psic
Pengzhenrongella sicca
Pathway
psic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4E96_17580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psic03021
]
J4E96_17580
03400 DNA repair and recombination proteins [BR:
psic03400
]
J4E96_17580
Enzymes [BR:
psic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4E96_17580
Transcription machinery [BR:
psic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4E96_17580
DNA repair and recombination proteins [BR:
psic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4E96_17580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QTE29090
UniProt:
A0A8A4ZAT7
LinkDB
All DBs
Position
complement(3855074..3858949)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDVNVFDELRIGLATAEDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHVELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDDAGRAEDLPNLQNEIDLEKKEITDRRDNDIEARAKKLEAD
LAELEAEGARADARRKVRDSAEREMTQLRKRSDLELERLDTVWDKFKSLKVADLEGDELL
YRQLSDRYGNYFEGSMGAAAIQKRLQAFDLDAEAESLRDTIKNGKGQRKTRALKRLKVVN
AFLTTSNTPEGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDRPGALGEGR
SFSSVSEAIMAFDGKTLDLNAEISIRLPDLVPPSEGFTAPEGWSQDEAIVFGTTLGRALF
NELLPVDYPWENGVVDKKRLSVIVNDLAERYPKVEVAASLDALKAAGFSWATRSGVTISI
SDVVTPAAKAGILEEHEARAAKVQTQYEKGLITDDERRQELIEIWTQASDKVAEAMRANF
PPRNTVFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIAT
HGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLALTVGVANADGTLRRH
DKVETSVYTRTLATTVEVDGVVLGESGDDVGDVLIDALLAAGVTELKVRSVLTCESRVGT
CAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQ
ELFEARTPKGEGPIAEFSGRVTIDESERIRKIVLTPDDGSEEIGYPITKRSRLLISDGDH
VEVGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRR
VTVLDSGDSDLLPGELAERGRFEDANRRAVAEGGQPASGRPELMGITKASLATDSWLSAA
SFQETTRVLTEASMSGRSDPLLGLKENVIIGKLIPAGTGLPRYGNVSVEPTEEAKAELYP
SFGYDEIDFPALGLGSGEAIPLEDLDFGDFR
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgatgagttgcgcatcggcctggccacggccgaggacatc
cgcgcctggtcccacggcgaggtcaagaagcctgaaaccatcaactaccgcaccctgaag
ccggagaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctcgaaggtgcgccgcgagcgcatgggccacgtcgagctcgccgccccc
gtgacccacatctggttcttcaagggtgtgccgtcgcgcctggggtacctgctcgacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgtccgtcgac
gacgcaggccgcgccgaggacctccccaacctccagaacgagatcgacctggagaagaag
gagatcaccgaccgccgcgacaacgacatcgaggcccgcgccaagaagctcgaggccgac
ctggccgagctcgaggccgagggtgcccgcgccgacgcccgccgcaaggtgcgcgactcg
gccgagcgcgagatgacgcagctgcgcaagcgctccgacctcgagctcgagcgcctggac
acggtgtgggacaagttcaagagcctcaaggtcgccgacctcgagggcgacgagctgctc
taccgccagctgtccgaccgctacggcaactacttcgagggttcgatgggtgccgccgcg
atccagaagcggctgcaggccttcgacctcgacgccgaggccgagtcgctgcgcgacacg
atcaagaacggcaagggccagcgcaagacgcgcgcgctcaagcggctcaaggtcgtcaac
gcgttcctgaccacgtcgaacacgcccgagggcatggtcctggacgccgtcccggtcatc
cccccggacctgcggccgatggtccagctcgacggtggccggttcgccacgagcgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcggctgctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcgggcgcccggtgaccggaccgggcaaccggccgctcaag
tcgatctccgacatgctcaagggcaagcaggggcggttccgccagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcgggctgccgaagcagatggcgctcgagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcgcccgc
cccgtggtctgggatgtcctcgaagaggtcatcacggagcacccggtgatgctcaaccgc
gcgcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgagggcaag
gccatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggcgaccag
atggccgtgcacctgcccctgagcgcggaggcccaggccgaggcccggatcctcatgctc
tcgagcaacaacatcctcaagccgtccgacggtcgccccgtgaccatgccctcccaggac
atgatcatcgggctgtaccacctgacgtccgaccgcccgggcgccctcggagagggccgt
tcgttcagctcggtctccgaggcgatcatggcgttcgacggcaagacgctcgacctgaac
gccgagatctcgatccggctgcccgacctggtcccgccgtcggagggcttcaccgccccc
gagggctggtcgcaggacgaggcgatcgtcttcggcaccaccctcggccgggcgctgttc
aacgagctgctgcccgtcgactacccgtgggagaacggcgtcgtcgacaagaagcgcctc
tcggtgatcgtcaacgacctcgccgagcgctacccgaaggtcgaggtcgcggccagcctg
gacgcactcaaggccgccggcttcagctgggccacccggtccggcgtgaccatctcgatc
tccgatgtcgtcaccccggccgccaaggccgggatcctcgaggagcacgaggcgcgcgcc
gccaaggtccagacccagtacgagaagggtctgatcaccgacgacgagcgtcgccaggag
ctcatcgagatctggacccaggcgtcggacaaggtcgccgaggcgatgcgggccaacttc
ccgccccgcaacacggtgttccggatggtcggctcgggtgcgcgtggtaactggatgcag
gtccgtcagatcgccggtatgcgcggcctcgtggcgaacccgaagggcgagatcatcccg
cgcccgatcaagtccaactaccgcgagggcctgtccgtcctcgagtacttcatcgccacc
cacggcgcccgcaaggggctggcggacaccgcgctgcggaccgccgactccgggtacctg
acgcgtcgactcgtcgacgtgtcgcaggacgtcatcgtccgcgaggacgactgcggcacc
gagcgcgggctggccctgacggtcggcgtcgcgaacgcggacggcacgcttcgccgccac
gacaaggtcgagacgagcgtctacacccggacgctcgccacgacggtcgaggtcgacggc
gtggtgctcggcgagtccggcgacgacgtcggtgacgtgctcatcgacgcgctcctcgcc
gcgggggtgaccgagctcaaggtgcgctcggtcctcacgtgcgagtcgcgggtcggtacg
tgcgccaagtgctacggccggtcgctcgcgaccggcaagctcgtcgacatcggcgaggcc
gtcggcatcatcgcggcccagtcgatcggcgagcccggcacgcagctcacgatgcgtact
ttccacaccggtggtgtggcgtcggccgacgacatcacgcagggtctgccccgcgtgcag
gagctcttcgaggcgcgcacccccaagggtgagggccccatcgcggagttctccggtcgg
gtcacgatcgacgagtccgagcggatccgcaagatcgtgctcaccccggacgacggctcg
gaggagatcggctacccgatcaccaagcggtcgcggctgctcatctccgacggcgaccac
gtcgaggtcggcacccagctcgtccagggcgccgtcgaccccaagaaggtgctgcgcatc
ctcggcccccgggccacgcagaagcacctcgtcgacgaggtccaggaggtctaccgctcg
cagggcgtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgc
gtgacggtcctcgactccggtgactccgacctgctgcccggcgagctcgccgagcgtggc
cggttcgaggacgcgaaccggcgcgcggtcgccgaaggcggccagcccgcctccggccgg
cccgagctcatgggcatcacgaaggcctcgctcgcgaccgactcgtggctctcggcggcc
tccttccaggagaccacccgcgtgctgaccgaggcgtcgatgagcgggcgcagcgacccg
ctgctggggctcaaggagaacgtcatcatcggaaagctcatcccggcgggtaccggtctt
ccccggtacggcaacgtctcggtcgagcccaccgaagaggcgaaggccgagctgtacccg
agcttcgggtacgacgagatcgacttcccggcgctggggctcggctccggcgaggcgatc
ccgctggaggacctcgacttcggggacttccgctga
DBGET
integrated database retrieval system
