Pseudomonas sichuanensis: LOY51_01995
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Entry
LOY51_01995 CDS
T08582
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY51_01995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psih03021
]
LOY51_01995
Transcription machinery [BR:
psih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOY51_01995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
MerR
HTH_24
HTH_29
HTH_11
HTH_17
Sigma70_r3
TnsD
Phage_terminase
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UVL89707
LinkDB
All DBs
Position
complement(432261..432779)
Genome browser
AA seq
172 aa
AA seq
DB search
MTSAQSPHAELVSALYRDHRGWLLAWLQRSTACRQRAEDLSQDTFVRLLGRERLDAPREP
RAFLVAVAKGLLFDYFRRAALEQAYLAELALLPEAEQPSPELQYLILEDLKAIDRLLGKL
SSKARAAFLHNRLDGLGHAEIAQRLGVSVSRVRQYIAQGMRQCYIALYGQPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgacgtctgcgcagagcccacacgccgaactggtcagcgcgctgtaccgcgaccatcgc
ggctggctgctcgcctggctgcaacgcagcacggcctgccgccagcgcgccgaagacctg
agccaggacaccttcgtgcgcctgctcggccgcgaacggctggacgccccccgcgaaccc
cgcgcattcctggttgccgtggccaagggcctgctgttcgactacttccgccgcgccgcg
ctggaacaggcctacctcgcggaacttgcgctgttgcccgaagccgaacagccctcgcca
gaactgcaatacctgatcctcgaagacctcaaggccatcgaccgcctgctcggcaagctg
tcgagcaaggcgcgcgccgcgttcctgcacaaccgcctggacggcctcggccatgccgaa
atcgcccagcgcctgggggtttcggtgtcccgagtgcgccagtacatcgcccaaggcatg
cgccagtgctacatcgccctgtacgggcagccgacatga
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integrated database retrieval system
