KEGG   Pseudomonas sichuanensis: LOY51_02000
Entry
LOY51_02000       CDS       T08582                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psih  Pseudomonas sichuanensis
Pathway
psih03030  DNA replication
psih03430  Mismatch repair
psih03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOY51_02000
   03430 Mismatch repair
    LOY51_02000
   03440 Homologous recombination
    LOY51_02000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psih03032]
    LOY51_02000
   03400 DNA repair and recombination proteins [BR:psih03400]
    LOY51_02000
Enzymes [BR:psih01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOY51_02000
DNA replication proteins [BR:psih03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOY51_02000
DNA repair and recombination proteins [BR:psih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOY51_02000
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 GlfB_C
Other DBs
NCBI-ProteinID: UVL89708
LinkDB
Position
complement(433072..433782)
AA seq 236 aa
MNLFAWLRPPAPTLDDHQHQRLATLPGPAPLAVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGQQFERTLHRPEQKTNASVLIHGLGPSALAAGCNPAEALLDLMAFIG
DSPVLAFHASFDQHMLARALQDSLGLRLRHPFFDVAELAPMLNPDTVLREAGLDDWIARF
GLEVQARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLKQWRRRKMPSHGF
NT seq 711 nt   +upstreamnt  +downstreamnt
gtgaacctgttcgcctggctgcgcccaccggcgcccacgctggacgatcaccagcaccag
cgcctggccaccctgcccgggcctgcgccactggccgtgtgctccctgcgtgagcagcgc
tgggtggtgctcgacctggaaaccagcggcctgaacctcaaccgcgaccaggtgctgtcg
atcggcgcggtggctatcgaggatggtgccatcgacctcggccagcagttcgagcgcacc
ctgcaccgccccgagcagaagaccaacgccagtgtgctgatccacggcctcggccccagc
gccctggccgccggttgtaatccggcagaagccttgctcgacctcatggcgttcattggc
gacagcccggtgctggcgttccacgcgtcgttcgaccagcacatgctggcgcgggcgctg
caggacagccttggcctgcgcctgcggcacccgtttttcgatgtggcggagctggccccc
atgctcaaccccgacacggtgctgcgtgaagccgggctggatgactggatcgcccgtttc
ggcctcgaagtccaagcccgccaccatgccagtgccgacgcccaggtaaccgccgagctg
gccctgatcctgttcagccaggcccgccgccagcaactggacagcccgttgcagctggag
caaaggcttaaacagtggcgtcggcgcaaaatgccgagtcacggcttctaa

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