Pseudomonas sichuanensis: LOY51_02755
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Entry
LOY51_02755 CDS
T08582
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY51_02755 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psih02044
]
LOY51_02755 (tssC)
Secretion system [BR:
psih02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY51_02755 (tssC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
UVL89846
LinkDB
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Position
582771..584243
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AA seq
490 aa
AA seq
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MSTAAEQQSAENSEFSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKK
ALVDRMIAEIDAKLSRQMDEILHHPDFQSMESAWRGLQLLVDRTNFRENIKIEILNVSKQ
DLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAVIANYFMSPSSPDVKLMQYVSSVA
CMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFRESEDARYIGLTVPR
FLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQ
SGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSAN
SAQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYIKVLQREQLGSWKERTDLELE
LNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFT
LSLVGKLDKE
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcagcagagcaacagagcgccgagaacagcgaattcagcattctcgacagc
atcatcgccgaaacccgcctgaccccggatgacgaagcctacgacatcgccaagcgcggc
gtgtcggccttcatcgaagaactgctcaagccgcagaatgacggcgagccggtcaagaaa
gcgctggtcgaccgcatgatcgccgagatcgatgccaaactcagccgccagatggacgag
atcctccaccacccggacttccagtccatggagtccgcctggcgcggcctgcagttgctg
gtcgaccgcaccaacttccgcgaaaacatcaagatcgagatcctcaacgtctccaagcag
gacctgctggacgacttcgaagactcgccggaagtcatgcaggctggcctgtacaagcac
atctacaccgctgaatacggccagttcggtggccagccggtcggcgcggtcatcgccaac
tacttcatgtcgccgagctcgccagacgtcaagctgatgcagtacgtctccagcgtcgcc
tgcatgtcccacgcgccattcatcgccgcggccggcccgaaattcttcggcctcgaaagc
ttcaccggcctgcccgacctgaaggacctgaaggatcacttcgaaggcccgcagttcacc
aagtggcagagcttccgcgagtccgaggacgcgcgctacatcggcctgaccgtgccgcgt
ttcctgctgcgcaacccgtacgacccggaagagaacccggtcaagtcgttcgtctacaag
gaaaccgtggccaacagccacgagcactacctgtggggcaacaccgcctacgccttcggc
accaaactgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccgcag
agcggtggcgcggtggaagacctgccgctgcaccacttcgagagcatgggcgagatcgag
accaagatcccgaccgaagtgctggtgtccgaccgtcgcgagtacgagctggccgaagag
ggcttcatcgccctgaccatgcgcaagggcagcgacaacgcggcgttcttctcggccaac
tcggcgcagaaaccgaagttcttcggcatcagcgccgaaggcaagactgccgagctgaac
tacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggcccactacatc
aaggtcctgcagcgcgagcagctgggctcctggaaggaacgcaccgacctggagctggaa
ctgaacaagtggatccgccagtacgtggccgaccaggagaacccgagcgccgaagtgcgt
ggccgtcgtccgctgcgcgccgcccaggtgatcgtcagcgacgtggaaggtgagccgggc
tggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggcgccgacttcacc
ctgtcgctggtcggcaagctggacaaggagtaa
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