KEGG   Pseudomonas sichuanensis: LOY51_02755
Entry
LOY51_02755       CDS       T08582                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
psih  Pseudomonas sichuanensis
Pathway
psih02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:psih00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    LOY51_02755 (tssC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psih02044]
    LOY51_02755 (tssC)
Secretion system [BR:psih02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LOY51_02755 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UVL89846
LinkDB
Position
582771..584243
AA seq 490 aa
MSTAAEQQSAENSEFSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNDGEPVKK
ALVDRMIAEIDAKLSRQMDEILHHPDFQSMESAWRGLQLLVDRTNFRENIKIEILNVSKQ
DLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAVIANYFMSPSSPDVKLMQYVSSVA
CMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFRESEDARYIGLTVPR
FLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQ
SGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFSAN
SAQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYIKVLQREQLGSWKERTDLELE
LNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFT
LSLVGKLDKE
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgagcaccgcagcagagcaacagagcgccgagaacagcgaattcagcattctcgacagc
atcatcgccgaaacccgcctgaccccggatgacgaagcctacgacatcgccaagcgcggc
gtgtcggccttcatcgaagaactgctcaagccgcagaatgacggcgagccggtcaagaaa
gcgctggtcgaccgcatgatcgccgagatcgatgccaaactcagccgccagatggacgag
atcctccaccacccggacttccagtccatggagtccgcctggcgcggcctgcagttgctg
gtcgaccgcaccaacttccgcgaaaacatcaagatcgagatcctcaacgtctccaagcag
gacctgctggacgacttcgaagactcgccggaagtcatgcaggctggcctgtacaagcac
atctacaccgctgaatacggccagttcggtggccagccggtcggcgcggtcatcgccaac
tacttcatgtcgccgagctcgccagacgtcaagctgatgcagtacgtctccagcgtcgcc
tgcatgtcccacgcgccattcatcgccgcggccggcccgaaattcttcggcctcgaaagc
ttcaccggcctgcccgacctgaaggacctgaaggatcacttcgaaggcccgcagttcacc
aagtggcagagcttccgcgagtccgaggacgcgcgctacatcggcctgaccgtgccgcgt
ttcctgctgcgcaacccgtacgacccggaagagaacccggtcaagtcgttcgtctacaag
gaaaccgtggccaacagccacgagcactacctgtggggcaacaccgcctacgccttcggc
accaaactgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccgcag
agcggtggcgcggtggaagacctgccgctgcaccacttcgagagcatgggcgagatcgag
accaagatcccgaccgaagtgctggtgtccgaccgtcgcgagtacgagctggccgaagag
ggcttcatcgccctgaccatgcgcaagggcagcgacaacgcggcgttcttctcggccaac
tcggcgcagaaaccgaagttcttcggcatcagcgccgaaggcaagactgccgagctgaac
tacaagctgggcacccagctgccgtacatgatgatcgtcaaccgcctggcccactacatc
aaggtcctgcagcgcgagcagctgggctcctggaaggaacgcaccgacctggagctggaa
ctgaacaagtggatccgccagtacgtggccgaccaggagaacccgagcgccgaagtgcgt
ggccgtcgtccgctgcgcgccgcccaggtgatcgtcagcgacgtggaaggtgagccgggc
tggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggcgccgacttcacc
ctgtcgctggtcggcaagctggacaaggagtaa

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