Pseudomonas sichuanensis: LOY51_02810
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Entry
LOY51_02810 CDS
T08582
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02025
Biofilm formation - Pseudomonas aeruginosa
psih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOY51_02810 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY51_02810 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psih02044
]
LOY51_02810 (tssM)
Secretion system [BR:
psih02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY51_02810 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UVL89857
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All DBs
Position
595877..599404
Genome browser
AA seq
1175 aa
AA seq
DB search
MKNFFKKVGAFLAKTWVWSLLLVLALALLVWFAGPLLAVADNKFWEDAAARLLTISVLFL
VWGLWMVFASWRANNRKQEELESEDGRERLEREERKDEEAREIKARFKHALSTLKHSSLY
GGRSERWRRDLPWYLVLGPQGAGKTSLIDHSGLEFPINALERKLARDPSSGDFCDFYFAE
QAVLVDTAGRFLNQSDSEIDGSAWRVLLDQLRLRRRNRPLNGVVVTVPLDTLLGGEAAVN
DLAQKVRSRLQELRQRLHVEVPVYLVLSKTDRLQGFDAFFDQQSREENEQVFGITFGKGQ
NGADTELLAKEFQGLLQRLGDQVTQRMHHERNTQRRARILDFPHQLGRIGDQLCLFVDAA
FTGNRYQRASQLRGFYLTSAPHQAPRVDSDNGFHPGQPGRGAVQGRSRFTLQLFSRVIFP
EYDLAGLDQRERRRIHWGQRAVYLGALGALALFGALWAGSFSGNHERLEQVRELGRQWQR
QHLALDARDDALAALKPLDTAWQASRVFPVPGDVSLLQRGGLYQGVPANEVLQPAYQREL
ETVLLPRVAQMVEGQIRSNLKNRERLLNSLRAYLMLGLPERRDQAWLKDWVAAGWSQRYN
GNTAAQDSLNTHFGRLLEQSFAYPLNDALVAQARQVLRAESLASVVYRVLREQARSLPEY
RLSQQLGPQAAQFVGIDYPIPGFYTSQGYQQYFSVQGANLVNDILRDNWVLGEGSGISDM
DMRRLMVELEQLYFRDYANYWGEAVNQVGLIPFSDAGEGADQLSALTAANSPLLLLLTEV
RENTRFPVLAEATDEGNPAAEAAANKAVAKKLGKGGAAVAGAVADKARDALAKKPLPDTA
RMALQRRFEPLHRLLDDNNGPGPDLAPTLQALNDLQQQLAGLARSNQAEEASYQMAKARM
SGQRDALSSLRNGTVRLPRPVAGWFNLLSDDIWRMVLNDTYTYLNQRYQSELYSHYGRTI
ESRYPFNAHGTSDVAISDFRDFFKAQGVADRFFDTYMRPFVSGEPGAYRLRSLDGQSLPM
TKAYLEQMSAAQTIRQSFFAQNPEEPQVQFKLEPYTLDPAVSRAEFRFGDTVIDYRHGPI
VSTSLKWPTEAQDGNTSLTLEQLNGRPMALEKNGGPWSLFRLLDLMQTEYLKGRDTMVLK
ANVGGMRANYLLTSQRAPNPFDLSVLRGFRLPGEL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattttttcaagaaagtaggcgccttcctcgccaagacctgggtctggagcctg
ctgctggtgctggccctggcgctgctggtgtggttcgccggcccgttgctggccgtggcc
gacaacaagttctgggaagacgccgccgcgcggttgctgaccatcagcgtgctgtttctg
gtgtggggcctgtggatggtgttcgccagctggcgcgccaacaaccgcaagcaggaagag
cttgagagcgaggacggccgcgagcgcctggaacgcgaagagcgcaaggacgaggaggcc
agggagatcaaggcccgcttcaagcatgccttgtccaccctcaagcattcgagcctgtat
ggcgggcgcagcgaacgctggcgccgcgacctgccctggtacctggtgctcggcccccag
ggcgcgggcaagaccagcctgatcgaccattcgggcctggagttcccgatcaacgcgctg
gagcgcaagctcgcccgtgatccgtccagcggcgatttctgcgatttctacttcgccgaa
caggccgtgctggtggacaccgccgggcgcttcctcaaccagtccgacagcgagatcgac
ggcagcgcctggcgcgtgctgctcgaccagctgcgcctgcgccgacgcaaccgcccgctc
aacggcgtggtggtcaccgtgccgctggacaccctgttggggggcgaggcggcggtcaac
gacctggcgcagaaagtccgctcgcgcttgcaggagctgcgccagcgcctgcacgtcgaa
gtgccggtgtacctggtgctgagcaagaccgaccgcctgcaaggctttgacgccttcttc
gaccagcagtcgcgcgaagagaacgagcaagtgttcggcatcaccttcggcaagggccag
aacggcgccgacaccgagctgctggccaaggaattccagggcctgctgcaacgcctgggc
gaccaggtcacccagcgcatgcatcacgagcgcaacacccagcgccgcgcgcgcatcctc
gacttcccgcaccagctggggcgcatcggcgaccagctgtgcctgttcgtcgacgccgcc
ttcactggcaaccgctaccagcgcgccagccaactgcgcggcttctacctgaccagcgcg
ccgcatcaggcgccgcgggtcgacagcgacaacggcttccaccccggccagcccggccgt
ggcgcggtgcagggccgctcgcgcttcaccctgcaactgttcagccgggtgatcttcccc
gagtacgacctggccggcctcgaccagcgcgaacgccgccgcatccactggggccagcgt
gccgtctacctcggtgccctgggcgccctggcgctgttcggcgcgctgtgggctggcagt
ttctccggcaaccacgagcgcctggaacaggtgcgtgagctgggccgtcaatggcagcgc
caacaccttgccctggatgcccgcgatgacgccctggccgcgctcaagccgctggacacc
gcctggcaggcctctcgcgtgttccccgtgcccggcgatgtctcgctgctgcaacgcggc
ggcctgtaccagggcgtgccggccaacgaggtgctgcaaccggcctaccagcgcgagctg
gaaaccgtgctgctgccccgggtggcgcagatggtcgaagggcagatccgcagcaacctg
aaaaaccgcgagcgcctgctcaacagcctgcgcgcctacctgatgctcggcctgcccgag
cgtcgcgaccaggcctggctcaaggactgggtggcggccggctggtcgcagcgctacaac
ggcaacacggccgcccaggacagcctgaacacccacttcgggcgcctgctcgagcaatcg
ttcgcctacccgctcaacgacgccctggtggcccaggcccgccaggtgctgcgcgccgaa
tcgctggccagcgtggtgtaccgcgtgctgcgcgaacaggcccgcagcctgcccgaatac
cgtctcagccagcagctcgggccgcaggccgcgcagttcgtcggcatcgactacccgatc
cccggcttctacacctcccagggttaccagcagtacttctcggtgcagggcgccaacctg
gtcaacgacatcctgcgcgacaactgggtgctcggcgagggcagcggcatcagcgacatg
gacatgcgccgcctgatggtggagctggagcagctgtacttccgcgactacgccaactac
tggggcgaggcggtcaaccaggtcggcctgatcccgttcagcgacgcaggcgaaggcgcc
gatcagctgtcggcgctgaccgccgccaactcgccgctgctgctgttgctcaccgaggtg
cgcgagaacacccgcttcccggtactggccgaagccaccgacgaaggcaacccggccgcc
gaagccgccgccaacaaggccgtggccaagaagctcggcaagggtggcgcggccgtggcc
ggtgccgtggccgacaaggcccgcgacgctctggccaagaagccgctgccggacactgcg
cgcatggccctgcaacggcgcttcgagccgctgcaccggctgctcgacgacaacaacggc
ccgggccccgacctggcgccgaccctgcaagcgctcaacgacctgcagcagcaactggcc
ggcctggcccgctccaaccaggccgaagaagcctcgtaccagatggccaaggcgcgcatg
tcggggcaacgtgacgccctgagcagcctgcgcaacggcaccgtgcgcctgccgcgcccg
gtggccggctggttcaacctgctgtccgacgacatctggcgcatggtgctcaacgacacc
tacacctacctcaaccagcgctaccagagcgagctgtacagccactacggccgcaccatc
gagtcgcgctacccgttcaacgcccatggcaccagcgacgtggcgatcagcgacttccgc
gacttcttcaaggcccagggcgtggcggatcgcttcttcgacacctacatgcgcccgttc
gtcagcggtgagcccggcgcctaccgcctgcgcagcctcgacggccagagcctgccgatg
accaaggcgtacctcgaacagatgagcgccgcccagaccatccgccagagcttcttcgcg
cagaaccccgaagagccgcaggtgcagttcaagctcgagccgtacaccctcgacccggcg
gtgagccgcgccgagttccgcttcggcgacacggtgatcgactaccgccacggcccgatc
gtctccaccagcctgaagtggccgaccgaagcccaggacggcaacaccagcctgaccctg
gagcagctcaacggccgccccatggcgctggagaagaacggtggcccgtggtcgctgttc
cgcctgctcgacctgatgcagaccgagtacctcaagggccgcgacaccatggtgctcaag
gccaatgtcggcggcatgcgcgccaactacctgctgaccagccagcgcgcgccgaacccg
ttcgacctgagcgtgctgcgcggcttccgcctgccaggggagctgtga
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