Pseudomonas sichuanensis: LOY51_03850
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Entry
LOY51_03850 CDS
T08582
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psih03016
]
LOY51_03850 (truB)
Enzymes [BR:
psih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LOY51_03850 (truB)
Transfer RNA biogenesis [BR:
psih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOY51_03850 (truB)
Prokaryotic type
LOY51_03850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UVL90050
LinkDB
All DBs
Position
831479..832396
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLESDKGYETVMQMGQTTNTGDAEGEVLQTREVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLLSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNGRFIGIGEVSEDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacctccaacgccgcgttgcagaaggtccgctggttgctcaatgccgagaag
gccggccacaccggcagcctcgacccactggccagcggcgtgctgccgctgtgcttcggt
gaagcgaccaagttctcgcagtacctgctcgagtccgacaagggctacgaaacggtcatg
cagatggggcagactaccaacaccggtgatgccgagggcgaagtcctgcagacccgtgag
gtgaccgtcggtcgcgccgacatcgaggcagtgctgccgcgttttcgcggcccgatcagc
cagataccgccgatgtactcggcgctcaagcgtgacggccagccgctttacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggagttg
ctcgagtgcgaaggcacccgtgcacggctgagcgtaggatgcagcaaaggcacctatatc
cgtaccctggtggaggatattggcgaggcacttggctgtggcgcctatgtcgccgaactg
cgcaggacccaggccgggcccttcgcactggcacagaccgtgaccctcgaggagctcgaa
caggcccacgccgaaggtggcaacgaagcgctcgatcgcttcctcatgccgtccgacagc
gggctgcaggactggccgctgttgagcctttccgagcacagtgcgttctactggctgcac
ggccaggccgtacgtgctccggatgcgccgcagttcggcatggtccgcgtacaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcgtggcgccgcgtcgg
ctgattcggtcggaatga
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