Pseudomonas sichuanensis: LOY51_05250
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Entry
LOY51_05250 CDS
T08582
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02020
Two-component system
psih02024
Quorum sensing
psih02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY51_05250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY51_05250
02025 Biofilm formation - Pseudomonas aeruginosa
LOY51_05250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psih03000
]
LOY51_05250
Transcription factors [BR:
psih03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LOY51_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
HTH_3
MarR_2
HTH_11
MarR
GntR
HTH_23
Sigma70_r4
HTH_19
HTH_36
Motif
Other DBs
NCBI-ProteinID:
UVL90304
LinkDB
All DBs
Position
1125554..1126240
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AA seq
228 aa
AA seq
DB search
MHDLRPQLLHGQWFRQLPTKVQDSLLALARTRELAPGQCLFQRGDAPCGLYAVLDGAMRV
GAVSSEGKEALLTLVEAPYWFGEISLFDGQPRTHDAFAEGATRLLWLPQAPLLEWLAREP
QHWRELALLMSHKLRWVFVALEQQSLLAAAPRVAHRLLQIAEGYGERDIAQWRLQLSQEQ
LALMLSLSRQTINQILRNLEQSGVLRLGYGEVEIVDAPRLRAMAQHPG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatctgcgtccccagttgctgcacgggcaatggttccggcagttgcccaccaag
gttcaggatagcctgctggccctggcgcgaacccgcgagctggcgccagggcaatgcctg
ttccagcgtggcgatgcgccgtgcgggctgtatgcggtgctcgacggggcgatgcgggtg
ggggcggtgagcagcgagggcaaggaggcgctgttgaccttggtcgaagcgccgtactgg
ttcggcgagatcagcctgttcgatggccagccacgcacccatgacgccttcgcggaaggg
gctacacgattactgtggctgccccaggcgcctttgctcgagtggttggcccgtgaaccg
cagcactggcgcgagttggcgttgctgatgagccacaagttgcgctgggtattcgtcgcc
ctggagcagcagagcctgctggccgcagcgccccgggtcgcccaccgcctgctgcagatc
gccgagggctatggcgagcgcgatatcgcccagtggcgcctgcaactgtcccaggagcag
ctggcgctgatgctgtcgctgtcgcgccagaccatcaaccagatcctcaggaacctcgaa
cagtccggcgtgctacgcctgggctatggcgaggtggagattgtcgatgcgccgcggctg
cgggcaatggctcagcatccaggctga
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