KEGG   Pseudomonas sichuanensis: LOY51_05545
Entry
LOY51_05545       CDS       T08582                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
psih  Pseudomonas sichuanensis
Pathway
psih03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psih00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LOY51_05545 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psih03019]
    LOY51_05545 (rnc)
   03009 Ribosome biogenesis [BR:psih03009]
    LOY51_05545 (rnc)
   03036 Chromosome and associated proteins [BR:psih03036]
    LOY51_05545 (rnc)
Enzymes [BR:psih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LOY51_05545 (rnc)
Messenger RNA biogenesis [BR:psih03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LOY51_05545 (rnc)
Ribosome biogenesis [BR:psih03009]
 Eukaryotic type
  90S particles
   RNase
    LOY51_05545 (rnc)
 Prokaryotic type
  rRNA processing factors
   LOY51_05545 (rnc)
Chromosome and associated proteins [BR:psih03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LOY51_05545 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: UVL90361
LinkDB
Position
1188559..1189248
AA seq 229 aa
MSASLARLERKLGYTFKDQDQMLLALTHRSYAGRNNERLEFLGDAILNFVVGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYQDADMQTARERILAWLTDEFEGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFLVECEVVLLNKKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagtgcttcccttgcccgcctggagcgcaagctcggctacaccttcaaggatcaggac
cagatgctgctggccctgacccatcgcagttatgccgggcgcaacaacgagcgcctggaa
ttccttggcgatgccattctcaacttcgtggtcggcgaagcgctgttcgagcgcttcccg
caggcccgggaaggccagctgtcgcgcctgcgagcgcgcctggtcaagggtgaaaccctg
gcccgcctggcccgtggcttcgaccttggcgagtacctgcgcctgggctctggcgagctc
aagagcggcggtttccgccgcgagtcgatcctcgccgacgccctcgaagcgctcatcggc
gccatctaccaggacgccgacatgcagactgcgcgcgagcgcatcctggcctggctgacc
gacgagttcgaaggcctgaccctggtcgacaccaacaaagaccccaagacccgcctgcag
gagtttctgcagtcgcgagcctgcgagctgccacgttacgaagtggtggacatccagggc
gaaccgcactgccggaccttcctcgtcgaatgcgaagtggtcctgctgaacaagaaaagc
cgtggccagggcgtaagccggcgtattgccgaacaggtcgccgccgccgccgcattgatc
gccctgggcgtggagaatggcaatgactga

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