KEGG   Pseudomonas sichuanensis: LOY51_05665
Entry
LOY51_05665       CDS       T08582                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psih  Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:psih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psih03400]
    LOY51_05665
Enzymes [BR:psih01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LOY51_05665
    5.6.2.6  RNA 3'-5' helicase
     LOY51_05665
DNA repair and recombination proteins [BR:psih03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LOY51_05665
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr Cas3-like_C_2 ResIII DprA_WH AAA_25
Other DBs
NCBI-ProteinID: UVL90385
LinkDB
Position
complement(1216886..1221166)
AA seq 1426 aa
MNLPAHQHPVLGLFHPAVATWFRQRFATVTEAQAGAWPLIHAGQSMLLAAPTGSGKTLSA
FLAVLDELFCQGLDRDGELPAQTQVVYVSPLKALSNDIRLNLEAPLAGISAQIEQLGLKA
PRITTAVRTGDTPQKERAAMRKLAPHILVTTPESLYVLMGSASGREGLAGVHTVIVDEIH
ALAGNKRGSHLALTLERLEALAGRPLRRIGLSATQRPVERVAQFLVGHQRPCAIVDIGHV
RQRDLALEVPPVPLGAVMASDVWALVYERLAALARQHRTTLIFVNTRRLAERLTRHLGER
LGNDAVAAHHGSLAKEHRLKAEQQLKAGELQVLVSTASLELGIDIGDVDLVCQIASPGSI
AAFLQRVGRSGHQVDGMPKGRLFPTSRDELIECVALLDCVRQGELDELHIPAAPLDVLAQ
QIVAEVSNQPWDERALFNLLRQATPYAALDQGHYQALLRMLAEGFNGRQGVRSAYLHRDA
VSASLRGRRGSQLTALTSGGTIPETADYAVLLEPQALNIGSVNEDFAIESIAGDIFQLGN
ASYRILRVEPGRVRVEDARGQPPTIPFWIGEAPGRSNELSGAVARLQARLDQQLQAGDFD
QALGWLRTTYQLDEGCAQQLLDYLGRTWQVLGALPSQQTLVMERFFDESGGTQLIIHSPY
GSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSSSHSFELDEVWRYLNSRTAEPI
LVQALLDAPLFGVRWRWCAAVAMALPRYVGGRKVPPQIQRMKSEDLIAAVFPDQIACLEN
LVGERQIPDHPLVEQTLDDCLHEAMDSEGWLALLRRMEAGDIRLLSRDLPAPSPLASAIL
NARPYTFLDDAPLEERRTQAVLNRRWNEVHSSDDLGALDIDAIRAVQAEAWPHAANADEL
HEALMSLGVITQAEAEANPGWIALLGQLAQSGRACRLQAGGPPMWLARERLDLISAVFPG
AHLEPALPVLPGFDQPYAQDTALSELLRARLSGFGPLTLAQIGTPLGCALGDCEQALARL
EGEGYVLRGQFSPGERAVQWCERHLLARIHRYTVKRLRREIEPVSLQDFMRFLFDWQHLA
GEERLRGPQAVGEVLGQLQGFPAAAGAWEAELLPARIKDYSPHWLDDACRSGHWAWSRLA
ATASASTLTSAPLVLLPREQLGLWRSLAPTPDPQQLSPRGQRVLQSLQAHGALFFDELAH
EAHLLPSELETALQELVGFGLASADSFSGLRSLITPAAKRASRSSRRGHPPLSSAMAHAG
RWALLRRAGSAVDKDPRLEHIARSLLRRYGVVCWRLLERESDVLPSWRELLHCYHRLEAR
GEIRGGRFIAGLAGEQFALPEAIGVLRQVRRREADGALVVVSGCDPLNLAGTLLPGAKVP
AVNGNRLLYRDGVAVACRVAGKYQYLVDVPLAEQTLWHQRLLRSGN
NT seq 4281 nt   +upstreamnt  +downstreamnt
atgaacctccccgcccatcagcacccggtgctcggcctgttccaccctgccgtggccacc
tggttccgccagcgcttcgccacggtcaccgaggcccaggccggtgcctggccgctgatc
catgcaggccagtcgatgctgctggccgcgccgaccggctcgggcaagaccctgagcgcc
ttcctcgccgtgctcgacgagctgttctgccaagggctcgaccgcgacggcgaactgccg
gcgcaaacccaggttgtctacgtctcgccgctcaaggcactgtccaacgatattcgcctg
aacctcgaggccccgctcgcaggcatcagcgcgcagatcgagcagctcggcctgaaggcg
ccacgcatcaccacggccgttcgcaccggcgacaccccgcagaaggagcgcgcggccatg
cgcaagctggccccgcatatcctggtgaccacgccggaatcgctgtacgtgctgatgggt
tcggcgtcgggccgcgaaggcctggccggcgtacacacggtgatcgtcgacgagatccac
gccctggccggcaacaagcgcggcagccacctggccttgaccctggaacgcctggaagcc
ctggccggccgccccttgcggcgcatcggcctgtcggcgacccagcgcccggtggagcgg
gtagcgcagttcctggttggccaccagcgcccctgcgccatcgtcgacatcggccatgtg
cgccagcgcgacctggccctcgaagtgccgccggtgccgctgggcgcggtcatggccagc
gatgtctgggcgctggtctacgagcgcctggccgcgctggcccgccagcaccgcaccacg
ctgatcttcgtcaacacccggcgcctggccgaacggctcacccgccacctgggcgagcgc
ctgggcaacgacgccgtggccgcgcaccacggcagcctggccaaggagcatcgcctgaag
gccgagcagcaactcaaggctggcgagttgcaggtgctggtcagcaccgcctcgctggag
ctgggtatcgatatcggcgatgtcgatctggtctgccagatcgcctcgcccggctcgatc
gccgccttcttgcagcgggtcgggcgctccgggcatcaggtcgatggcatgcccaagggc
cggctgttccccacctcgcgggacgagctgatcgagtgcgtcgccttgctcgactgtgta
cgccagggcgaactcgacgaattgcatatcccggcggcaccgctggacgtgctcgcccag
cagatcgtcgccgaagtgagcaaccagccctgggacgagcgcgcactgttcaacctgctg
cgccaggccaccccctacgccgccctcgaccaaggccactaccaggccctgctgcgcatg
ctcgccgagggtttcaacggccgccagggcgtgcgcagcgcctatctgcaccgtgatgcg
gtcagcgccagcctgcgcgggcgacgcggcagccagctgaccgcgttgaccagcggcggc
accatccccgaaaccgccgattacgccgtgctgctcgaaccccaggcgctgaacatcggc
agcgtcaacgaagacttcgcgatagaaagcatcgctggcgatatcttccagctgggcaac
gcctcctaccgcatcctgcgggtagagcctgggcgggtacgggtcgaggatgcccgaggc
cagccaccgaccattccgttctggatcggcgaggcgcccgggcgcagcaatgagctgtcc
ggcgcagtggcgcggctgcaggcgcgccttgatcaacaattgcaggccggcgatttcgac
caggcgctgggctggctgcgcaccacctaccaactggatgaaggctgcgcccagcaattg
ctcgactacctcggccgcacctggcaggtgcttggtgccctgccctcgcagcagaccctg
gtgatggagcgcttcttcgacgagtccggcggcacccagttgatcattcattcgccctac
ggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgcacgttc
aacttcgagctgcaggcggcggccagcgaggatgccatcgtgctgtcgctgtcgagcagc
cacagtttcgaactggacgaggtctggcgttacctgaacagccgcacggccgagccgatc
cttgtccaggccctgctcgacgcgccgctgttcggcgtgcgctggcgctggtgcgcggcg
gtggccatggccttgccgcgctatgtgggcgggcgcaaggtgccgccgcagatccagcgg
atgaagagcgaagacctgatagccgcggtattccccgaccagatcgcctgcctggagaac
ctggtcggcgagcggcagattcccgatcacccactggtcgaacagaccctcgacgactgc
ctgcacgaggccatggacagcgaaggctggctggcgctgctgcggcgcatggaggccggt
gacatccgcctgctcagccgcgacctgccggcgccttcaccgctggcctcggcgatcctc
aacgcccgcccctacaccttcctcgacgatgccccgctggaagagcggcgcacccaggcc
gtgctcaaccgccgctggaacgaagtgcacagcagcgacgacctcggtgcgctggacatc
gacgccatccgcgccgtgcaggccgaggcctggccgcacgcggccaacgccgatgaactg
cacgaagccttgatgagcctgggggtgatcacccaggccgaagccgaggccaacccaggg
tggatcgccctgcttgggcaactcgcgcagtccggcagagcctgccgcctgcaggcgggc
gggccgcctatgtggctggcccgtgagcgtcttgacttgatcagcgcagtgttccccggc
gcccacctggaaccagcgctgccagtgctcccgggcttcgaccagccttatgcgcaggac
accgcgctgagcgaactgctgcgagcccggctgagcggcttcggcccattgaccctcgcc
cagatcggaacgccgctgggttgcgccctgggcgactgcgaacaggccctcgcccggctg
gaaggcgaaggttacgtgctgcgcggccagttcagcccgggtgagcgcgcagtgcagtgg
tgcgaacgccacctgctggcgcgcatccaccgctatacggtcaagcgcctgcgccgcgag
atcgaaccggtcagcctgcaggacttcatgcgttttctgttcgactggcagcacctggcc
ggcgaagagcgcctgcgtggcccgcaggccgtgggcgaagtgctcggccagctgcaaggc
ttcccggctgccgccggcgcctgggaggcggaactgctgccggcacggatcaaggactac
agcccgcactggctggacgatgcctgccgcagcggccattgggcctggagccggctggcg
gccacggcctcggccagcaccttgaccagcgcacccttggtgctgctgccacgcgagcaa
cttggcctgtggcgcagccttgcgccaacgcccgatccgcagcagctatcgccgcgcggc
cagcgcgtgctgcaaagcttgcaggcccacggcgccctgttcttcgacgaacttgcccac
gaggcgcacctgctgcccagcgagctggaaaccgcgctgcaggaactggtcggctttggc
ctggccagcgccgacagtttcagtggcctgcgcagcctgatcaccccggcggccaaacgc
gcttcgcgcagcagccggcgcgggcatccgccgctgtcgagcgccatggcccatgccggg
cgctgggcgctgctgcgccgcgcgggcagcgcagtggacaaagacccgcgcctggaacat
atcgcccgcagcctgctgcgtcgctacggcgtggtgtgctggcgcctgctggagcgtgaa
agcgatgtgctgccgtcgtggcgtgagttgctgcattgctatcaccgcctcgaagcccgc
ggtgagatccgtggcgggcgctttatcgcagggctggccggcgagcagttcgccttgccc
gaagccatcggggtattgcgccaggtgcgcaggcgcgaagcggacggggcgctggtggtg
gtgagtggttgcgatccgttgaacctggcgggcaccttgctgccgggggccaaggtgccg
gcggtgaacggcaatcggctgctgtaccgcgatggggtggcggtggcgtgccgggtggcg
gggaagtatcagtatctggttgatgtgccgttggctgagcaaacgctgtggcaccagcgc
ttgttgcgctctggcaactga

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