Pseudomonas sichuanensis: LOY51_08040
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Entry
LOY51_08040 CDS
T08582
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03030
DNA replication
psih03430
Mismatch repair
psih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY51_08040
03430 Mismatch repair
LOY51_08040
03440 Homologous recombination
LOY51_08040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psih03032
]
LOY51_08040
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_08040
Enzymes [BR:
psih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY51_08040
DNA replication proteins [BR:
psih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOY51_08040
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOY51_08040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
nSTAND3
AAA_5
AAA_22
iSTAND
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
UVL90829
LinkDB
All DBs
Position
1728921..1729907
Genome browser
AA seq
328 aa
AA seq
DB search
MAEAYPWQQALWQQLAGRSQHAHAYLLHGPQGIGKRALAERLMARLLCQTPQGLDACGQC
KACLLLKAGSHPDNFVLEPEEADKPIKVDQVRELVSFIVQTAQQGGRKVVLIEPVEAMNV
NASNALLKSLEEPSGDTVLLLVSHQPSRLLPTIKSRCQQLTCPQPSLAQSRAWLADALAD
SGEDEREELLTLAAGSPLMAVSLQAKGVREQRALVTEGVKKLLKQQQSPSQLAEAWNNVP
LLLLFDWFCDWSHLILRYQLTQDEDGLGLADMRKVLQYLAQKSRQAKVLEVQAWILEQRQ
KVLGKANLNRVLLLEALLAHWVQLPGMR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcctacccctggcaacaggcgctttggcagcaactggccgggcgcagccag
catgcccatgcctacctgctgcatgggccccagggtatcggcaagcgtgccctggccgag
cggctgatggcgcggctgctgtgccagacgccccaggggctggatgcctgcgggcagtgc
aaggcgtgcctgctgctcaaggccggcagccatccggacaacttcgtgctggagccagaa
gaagccgacaagccgatcaaggtcgaccaggttcgcgaactggtgtcgttcatcgtacag
acggcccagcagggcgggcgcaaggtggtgctgatcgagccggtggaggcgatgaacgtc
aacgcgtccaatgccttgctcaagagccttgaggagccttccggcgataccgtgctgctg
ttggtcagtcaccagcccagccgcttgctgcccaccatcaagagccgttgccagcagctc
acctgcccgcagccgagcctggcccagagccgtgcgtggctggccgatgcgcttgccgat
agcggcgaagacgagcgcgaggagctgctgactctggccgccggctcgccgctgatggct
gtcagcctgcaggcgaagggggtgcgcgagcagcgcgcgctggtcaccgagggcgtgaag
aagctgctcaagcagcagcagtcgcccagccagttggccgaagcctggaacaacgtgccg
ttgctgttgttgttcgactggttctgcgactggtcgcacctgatcctgcgctatcagctg
acccaggacgaggacgggctaggcctggccgacatgcgcaaggtgctgcagtacctggcg
cagaagagccgccaggccaaggtgctggaggtccaggcgtggatcctcgagcagcgtcag
aaagtgctgggcaaggccaacctcaaccgtgtgctgctgctcgaagccttgctcgcccat
tgggtgcagctgccgggcatgcgctga
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