Pseudomonas sichuanensis: LOY51_08390
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Entry
LOY51_08390 CDS
T08582
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_08390
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY51_08390
Archaeal homologous recombinant proteins
LOY51_08390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
nSTAND_NTPase5
AAA_15
RsgA_GTPase
AAA_18
MMR_HSR1
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
UVL90886
LinkDB
All DBs
Position
complement(1800949..1804593)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIAREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGSRYRARWEANRAREKA
NGKLQNSRQSLYDLDSEQLLGSGKNEYKQLIEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKARETGERHNDLKKQAEHLLPMASDARALLDQQL
DQAQQQFKADQARQRQLEQQRVWFDEQRQLQAQHGEAHAALQAAEHNWQQLAEPRLDLQR
LERLAPQRHQFHRQQDLAGQLAPLAVAIAEQQRQQGELHSRTSELEQALETARQALAQHQ
AQHSDNAPRLRQAFAAQGDLARLDKELGEQRAACQQAAQEVSDAEQHLQQLQENQLRSQQ
QLAQIDAALADSEHLGSLANAWQAYLPQLKQVMLIGGRLAKGREELPGLQAQVSQANAQL
QAQRDNFEMLFREAGAEPHALAEQIDLLGAMLQDNRKQQRAVEELARLHGRELELRQAID
ALRDRQQQAMQQRQQLIGAGTAAKSELESAEQALTLTRQLLDRQRLARNTSVEELRAQLR
DGEPCPVCGSAEHPFHQPEALLHSLGRHDQAEEEAAQKQVEHLNARLVELRTELGVVNAQ
LKDYQQQQLTLGEQLQPLLEQVQAHALWPALAPQDDKARSAWLDGQLRRLGDEIDRDEKR
QGALLALQKDAARLTQQLQAASEAQQQAQRHLDQQHQALAADQQQLEQGLNDLASVLPQD
ILQALRDDPAQAFLGLDQQIALRRQQLDQRKDEQEEQQARQQQLDKLRDQQQARQHNQQQ
LLEKIAALDEQRQQAQATLGELLGEQASAEAWQQHMEAQLEQARAADADTAQRLQALRTQ
GVQLAAELNANSQRQQALEHEHQQLQGAIAQWRSSHPELDDAGLDRLLAIDDAQLGELRQ
QLQAAEKAIEQGRVLLQEREQRLQQHAAQAHGELPVEALEQSLAELQQQLVAQEQQCAEL
RAQQADDQRRQQAHQALAEQIDQAYQQWQRWARLSALIGSASGDVFRKIAQGYNLDLLLH
HANSQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVSG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccatccgcctgaagaacctcgcctcgctggccgggccgatcgacatc
gatttcaccgcagagcccctggccagcgccggcctgttcgccatcaccgggcccaccggc
gccggcaagagcaccctgctcgatgccctgtgcctggccttgttcggcactgtgccgcgg
ctgaacgacattgcccgggaagccaaggtgcccgacgccgacggcgacatccccacctcg
gacccgcgcaacctactgcgccgcggcaccggcagcggttttgccgaggtcgacttcgtc
ggcatcgacggcagccgctaccgcgcccgctgggaagccaaccgcgcccgcgagaaagcc
aatggcaagctgcagaatagccgccagagcctgtacgacctggacagcgaacagctgctt
ggcagtggcaagaatgaatacaagcaactgatcgaagcgcgcctggggctgaacttcgaa
cagttcacccgcgcggtaatgctggcccagagcgagttcggcgccttcctcaaggccgac
gacaaagagcgcagcgagctgctggaaaagctcaccaacacggcgatctacacccgcctc
ggccagcgcgccttcagcaaggcgcgggaaaccggcgaacgccacaacgacctgaagaag
caggccgagcacctactgccgatggcaagcgacgcccgcgccctgctcgaccagcaactg
gaccaggcccagcagcagttcaaggccgaccaggcccgccagcgccagctggaacagcag
cgcgtctggttcgacgaacaacgccagctgcaagcccagcacggcgaagcccatgcagcc
ttgcaagccgccgagcacaattggcagcaactggccgaaccgcgcctcgacctgcagcgc
ctggaacgccttgcaccgcagcgtcaccagttccatcgccagcaggatctggccgggcaa
ttggcgccgctggccgtggcgattgccgaacagcagcgccaacaaggcgaactgcatagc
cgcaccagcgaactcgagcaggcactggaaacggcgcgccaggccctggcccagcatcag
gcccagcacagcgataacgccccgcgcctgcgccaggcattcgccgcccaaggcgacctc
gcccgcctcgacaaagaactgggcgaacaacgcgcagcctgccagcaggctgcgcaggaa
gtcagcgacgctgagcaacacctgcagcagttgcaggaaaaccagctgcgcagccagcag
caactggcgcagatcgatgcggcattggccgacagtgaacacctgggtagcctggccaac
gcctggcaggcctatctgccgcaattgaagcaagtgatgctgatcggcggccggctggcc
aagggccgcgaggagttgccaggcttgcaggcccaggtgagccaggccaatgcccagctg
caagcccagcgcgacaacttcgagatgctgttccgcgaagccggggccgaaccccatgcc
ctggccgagcagatcgacctgctcggcgccatgctccaggacaaccgcaagcagcagcgc
gccgtcgaggaacttgcccgcctgcatggccgtgaactggaactgcgccaggcaatcgac
gccctgcgtgaccgccagcagcaggccatgcagcagcgccagcaactgatcggcgcaggc
accgcggccaagagcgagctggaaagcgccgagcaggccctgaccctgacccgccagttg
cttgatcgccagcgcctggcgcgcaacaccagcgtcgaagaactgcgcgcccagctgcgc
gatggcgagccgtgcccggtatgcggcagcgccgagcacccgttccatcagccagaagcc
ttgctgcacagcctgggccgccacgaccaggccgaggaggaagcagcgcagaaacaggtc
gaacacctcaacgccaggctggtggagctgcgtaccgagttgggcgtggtcaacgcccag
ctcaaggattatcagcagcaacagctcacgctgggcgaacagctacaaccgttgctcgaa
caggttcaggcccatgccctgtggccggcgctcgcgccccaggacgacaaggctcgcagc
gcctggctcgacggccagttgcgccgcctgggcgacgagatcgaccgcgacgaaaaacgc
cagggcgccctgctcgccttgcaaaaggacgccgctcgcctcacccagcagttgcaggct
gctagcgaggcccagcaacaggcccagcgccacctcgaccagcaacaccaagccctggct
gccgaccagcagcaactggaacagggcctgaacgacctggccagcgtgctgccccaggac
attcttcaggccctgcgcgacgacccggcccaggccttcctcggtcttgaccagcagatt
gccctgcgccgtcagcaactcgaccagcgcaaggacgaacaggaagaacaacaggcccgc
cagcagcagctggacaagctgcgcgaccagcaacaggcccggcagcacaatcagcaacaa
ctgctggagaaaatcgccgcactggacgaacagcgccagcaggcccaggccaccctcggc
gagctgctcggcgagcaggccagcgccgaagcctggcagcagcatatggaagcgcagttg
gaacaggctcgcgccgccgacgccgacactgcccagcgcttgcaggcattgcgtacccag
ggcgtgcaactggccgctgaactcaacgccaacagccagcgccagcaggccctggagcac
gagcaccagcagctgcagggcgcaatcgcccaatggcgcagcagccacccggaactggac
gacgccggcctcgaccgcctgctggccatcgacgacgcccagctcggtgagctgcgccaa
cagttgcaggcggcggagaaggccatcgagcaaggccgggtactgttgcaggagcgcgag
cagcgcctgcagcaacatgctgcccaagcccatggcgaactgccggtcgaagcgctggag
cagagcctcgccgagctgcaacagcagttggtcgcccaggagcagcaatgcgccgaactg
cgcgcccagcaggctgacgatcaacgccgccagcaggcacaccaggccctggccgaacag
atcgaccaggcctatcagcagtggcaacgctgggcacgcctgagcgccctgatcggttcc
gcctcgggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgttgctgcac
cacgccaacagccagctacgccaactggcccggcgctatcgcctcaagcgcggcggcagt
gccttgggcctgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcattcg
ctgtcgggcggcgaaaccttcctggtctcgctggcactggcactgggcctggcctcgatg
gcttccagcaccttgcgcatcgaatcgctgttcatcgacgagggcttcggcagcctcgac
cccgagtcgctgcaactggccatggacgctctcgacggcttgcaggcccagggccgcaaa
gtggcggtgatctcccacgtacaggagatgcacgagcgcatcccggtgcagatccaggtg
cgccggcaaggtaacggtctgagcgatgtcgaggtgagcgggtga
DBGET
integrated database retrieval system
