Pseudomonas sichuanensis: LOY51_09005
Help
Entry
LOY51_09005 CDS
T08582
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih00071
Fatty acid degradation
psih00280
Valine, leucine and isoleucine degradation
psih00310
Lysine degradation
psih00362
Benzoate degradation
psih00380
Tryptophan metabolism
psih00410
beta-Alanine metabolism
psih00640
Propanoate metabolism
psih00650
Butanoate metabolism
psih00907
Pinene, camphor and geraniol degradation
psih00930
Caprolactam degradation
psih01100
Metabolic pathways
psih01110
Biosynthesis of secondary metabolites
psih01120
Microbial metabolism in diverse environments
psih01200
Carbon metabolism
psih01212
Fatty acid metabolism
Module
psih_M00087
beta-Oxidation
psih_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LOY51_09005 (fadB)
00650 Butanoate metabolism
LOY51_09005 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LOY51_09005 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LOY51_09005 (fadB)
00310 Lysine degradation
LOY51_09005 (fadB)
00380 Tryptophan metabolism
LOY51_09005 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LOY51_09005 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LOY51_09005 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LOY51_09005 (fadB)
00930 Caprolactam degradation
LOY51_09005 (fadB)
Enzymes [BR:
psih01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LOY51_09005 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LOY51_09005 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LOY51_09005 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LOY51_09005 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
UVL90998
LinkDB
All DBs
Position
1933560..1935707
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSTAKIGLPEVKLGIYPGFGGTVRLPRLVGSDNAIEWIASGKENRAEDAL
KVGAVDAVVTPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDADVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKSGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcactctgaacgagctg
cgcgaggccgtcgacgccatcaaggccgacgcttcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgataatttcaagctg
cccgaggccgagctggttgccggcaacctggaagccaaccgtatcttcaacgccttcgaa
gacctcgaagtgccgacggttgccgccatcaacggcatcgccctgggcggtggcctggag
atgtgcctggccgccgattaccgaatcatgtccagcactgccaagatcggcctgccggaa
gtcaaactgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctggtcggc
tcggacaacgccatcgagtggatcgcttcgggcaaggaaaaccgtgccgaagacgccctg
aaagtcggcgccgtcgatgccgtggttacccctgagctgctgcaggcgggtgcactggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagcccaagctg
gagaagctcaagctcaacgccatcgaacagatgatggccttcgagactgccaagggcttc
gtcgcaggccaggccggcccgaactacccggcgccggtcgaagccatcaagagcatccag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggctgcgggcttcgccaag
ctggccaagacctcggttgccgagagcctgatcggcctgttcctgaatgaccaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggccgccgtactc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggccgtcaagggcacgccgatc
ctgatgaaggacatccgcgaggaagccatccagctgggcctgaacgaggcgtccaagctg
ctcggcaagcgcgtcgagaaaggccgcctcacccctgcgaagatggccgaagcgctcaac
gccattcgcccgaccctgtcgtatggcgatttcgccaacgtcgatatcgtggtcgaggcc
gtggtcgagaacccgaaggtcaagcaagcggtcttggccgaggtggaagggcaggtgaaa
gaggacgccatcctggcctccaacacctcgaccatctcgatcaacctgctggccaaggca
ctcaagcgcccagagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagtgaagtggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtcgac
tttgtgcgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcctacctg
atggacgtggtcgggatcgacaccggccaccatggccgtgacgtaatggctgaaggcttc
ccggaccgcatgaaggacgatcgtcgctctgccgtcgatgcgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcttcgatgccgacgtgctcgacgtgctcaagccggtcgttttcgaacagcgt
gaggttaccgacgaagacatcatcaattggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtctac
ggcatcggtttccctcctttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccaccccacc
gcgaagctgcgcgaaatggccaagagcggccagcgcttcttcaactga
DBGET
integrated database retrieval system
