Pseudomonas sichuanensis: LOY51_10920
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Entry
LOY51_10920 CDS
T08582
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psih03009
]
LOY51_10920
Ribosome biogenesis [BR:
psih03009
]
Prokaryotic type
ribosomal protein modification factors
LOY51_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
UVL91353
LinkDB
All DBs
Position
2352087..2354285
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AA seq
732 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISDKDRQGILRSIDRCTVKKVVQT
GPEFIIEQVDNLDADAQALLMPVSDSTTYIPGKDLPLEQTIANMSAILANLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEDIA
NAPFVHYPNEQWFKPGPKDALPEEILDQHCLAIFNPDGELRGSHLYDTNSGNKERGICSL
PFVRQSDAETVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEDELCL
PDVPQEVLAKYPGIVAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSFEVALERSLTELLQGRSFEGLNDLPQPTFDSLAVTEPNNFVEHFIDSSGVVSWRFFG
AKPDYEFVEWDFSGHGEDSNVQEADTLFGILQDMGKEVYMAVYDNLGATACRILVPGYSE
IYPVEDLIWDNTNRALGFRADILNLHSLDNRSLKLLLKRLDNAEVDDYTTITTLIGVEFD
DNTVWGQLTILELKLLIQLAVQRFEEAKELVEMFLQFNDNTVERGLFYQALNVVLEVVLD
DELQMEDYEHNFRRMFGNERMDAVLGSVDGSVRFHGLTPTSMKLEGLDRHLRLVESYKKL
HAARAKAAGLQG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaacctccgtctcgaagccaagttcgacgacttc
acggtgatcgccgaccagccgatccgctacaaaggcgatggctcggccccggggccgttc
gactatttcctggcgtcctcggcgctgtgcgcggcgtacttcgtcaagctgtactgccag
acccgcgacatccccaccgagaacatccgcctgtcgcagaacaacatcgtcgacccggag
aaccgctacaaccagatcttcaagatccaggtcgagctgcccgaagacatcagcgacaag
gaccgccagggcatcctgcgctccatcgaccgctgcaccgtgaagaaagtggtgcagacc
ggccccgagttcatcatcgaacaggtcgacaacctcgacgccgacgcccaggcgctgctg
atgccggtgtcggacagcaccacctacatccccggcaaggacctgccgctggagcagacc
atcgccaacatgtcggcgatcctcgccaacctggggatgaagatcgagatcgcttcgtgg
cgcaacatcgtgcctaacgtgtggtcgctgcacgtgcgcgacgcgcagtcgccgatgtgc
ttcaccaacggcaagggcgccaccaaggaagccgcgctggcttcggcgctgggcgagttc
atcgagcgcctgaactgcaacttcttctacaacgaccagttctggggcgaggacatcgcc
aacgcgccgttcgtgcactaccccaacgagcagtggttcaagcccgggcccaaggacgcg
ctgccagaagaaatcctcgaccagcactgcctggcgatcttcaaccccgacggcgagctg
cgcggctcgcacctgtacgacaccaactcgggcaacaaggaacgcggcatctgctcgctg
ccgttcgtgcgccagtccgacgctgagacggtgtacttcccgtccaacctgatcgaaaac
ctgtacctgagcaacggtatgagcgccggcaacaccctggccgaagcccaggtgcagtgc
ctgtcggagatcttcgagcgggcggtcaagcgcgagatcctcgaagacgagctgtgcctg
ccggacgtgccgcaggaggtgctggccaagtacccgggtatcgtcgccggtatccagggg
ctggaagagcagggcttcccggtgctggtcaaggacgcctcgctgggcggtgaattcccg
gtgatgtgcgtgaccctgatgaacccgcgcaccggcggcgtgttcgcctcgttcggcgcc
cacccaagcttcgaagtggcgctggagcgcagcctcaccgaactgctgcagggccgcagc
ttcgaaggccttaacgacctgccgcagccgaccttcgacagcctggcagtgaccgagccg
aacaacttcgtcgagcacttcatcgactccagtggcgtggtgtcgtggcgcttcttcggc
gccaagcccgactacgaattcgtcgagtgggacttcagcggccatggcgaggactccaac
gtacaagaggccgacaccttgttcggcatcctccaggacatgggcaaggaagtgtacatg
gccgtctacgacaacctcggcgccaccgcctgccgcattctggtgcccggctactcggag
atctacccggtcgaggacctgatctgggacaacaccaaccgcgcgctgggtttccgcgcc
gacatcctcaacctgcacagcctagacaaccgctcgctgaagctgctgctcaagcgcctg
gacaatgccgaggtggatgactacaccaccatcaccacgctgatcggcgtggagttcgac
gacaacacggtgtggggccagctgaccatcctcgagctgaagctgctgatccagctggcg
gtgcagcgcttcgaagaggccaaggaactggtggaaatgttcctgcagttcaacgacaac
accgttgagcgcgggctgttctaccaggcgctgaacgtggtgctggaggtggtgctggac
gacgagttgcagatggaagattacgagcacaacttccgtcgcatgttcggcaacgagcgc
atggacgcggtgctgggctcggtggatggcagcgtgcgtttccacggcctgaccccgacc
agcatgaagctcgaaggcctggaccgccacctgcgcctggtggagagctacaagaagctg
catgcggcgcgggcgaaggcggctgggttgcagggctga
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