Pseudomonas sichuanensis: LOY51_11870
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Entry
LOY51_11870 CDS
T08582
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOY51_11870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psih03000
]
LOY51_11870
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_11870
Enzymes [BR:
psih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LOY51_11870
Transcription factors [BR:
psih03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LOY51_11870
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOY51_11870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UVL91529
LinkDB
All DBs
Position
2599576..2600508
Genome browser
AA seq
310 aa
AA seq
DB search
MTRLSSLHAVRRALRPGGVHLLWLRYQPPYHWPSTQAFLAARCIPGIETFADGVYRRSFV
HAGRHGVLEANPVAGPWLQVRLHEVAPALLPGLIARLRRVYDLDARPAQIAAGLAGDALM
ARLLAARPGLRVPQGWDAFEQAMRTVLGQQISVAGAMTLAGRLVARHGALLQVEAAALSH
VFPSAMAVAAAELEGLGMPRARAATLGTLARALLEQPNLLQPGQTLDAVLARLCSLKGIG
PWSAHYLALRQVGARDALPLGDVALVKALRLLEGPQVLLAERALAWRPWRAYAAQHLWAS
LAVTGPIGAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtctttcttcccttcacgccgtccgccgcgccctgcgcccggggggcgtgcac
ctgctctggctgcgctaccagccgccctatcactggccctcgacccaggccttcctggct
gcgcgctgcatccccggtatcgaaaccttcgccgatggcgtgtaccggcgcagcttcgtc
catgccggccggcacggcgtgctggaagcgaacccggtagcaggcccctggctgcaggtg
cgtctgcatgaagtggcgccggcgctgttgccggggctgatcgcacgcctgcgccgggta
tacgacctggatgcgcgcccggcacagattgccgccgggctggccggcgacgcgctcatg
gcgcggctgctcgctgcgcgccccggtttgcgtgtaccccagggctgggatgctttcgaa
caggccatgcgcacggtgctcggccagcagatcagcgtggccggggcgatgaccctggcc
gggcgcttggtggcgcggcatggggcgttgctgcaggtggaggcggccgcgctgagccat
gtattcccctcggccatggcggtggcggcggctgaactcgaagggctgggtatgccacgg
gcgcgggcggcaaccctcggcaccctggccagggcgctgcttgagcagccgaacctgctg
cagcctgggcaaaccctggacgcggtgctcgcacgcttgtgcagcttgaagggcatcggc
ccgtggagtgcccactacctggccctgcgccaggtgggggccagggatgccttgccgttg
ggcgatgtggcgctggtcaaggccctgcgcctgctggaggggccgcaggtgctgctggcc
gagcgggccttggcctggcggccatggcgcgcttatgcggcgcagcacctgtgggcgtct
ttggcggtcactggcccgattggcgccagctga
DBGET
integrated database retrieval system
