Pseudomonas sichuanensis: LOY51_14570
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Entry
LOY51_14570 CDS
T08582
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOY51_14570 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_14570 (xthA)
Enzymes [BR:
psih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LOY51_14570 (xthA)
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LOY51_14570 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UVL87032
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All DBs
Position
3232602..3233414
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AA seq
270 aa
AA seq
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MKVVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLAEVEALGYHVHYHGQK
GHYGVALLSREKPLSLSKGFASDEEDAQRRFIWGTFADRNGTPITVMNGYFPQGESRDHP
TKFPAKQRFYSDLQVLLESQFKNDQPLLVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF
LPEEREWMERLKGWGLVDTFRHLHPEVADQFSWFDYRSRGFEDEPKRGLRIDLIMASQGL
LPRVKAAGIDYELRGMEKPSDHAPIWLELG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgtctcgttcaacatcaatggcctgcgcgcccgcccgcaccagctggcggcg
ctgatcgacaagcaccaaccggacgtgatcggcctgcaggaaaccaaggtcagcgacgaa
cagttcccgctggctgaagtcgaggcgctcggctaccacgtgcattaccacggccagaaa
ggccactacggcgtggcgctgctgtctcgggaaaagccgctgtcgctgtccaagggtttc
gccagtgatgaagaggatgcccagcgccgcttcatctggggcaccttcgccgaccgtaac
ggcacgccgatcacggtgatgaacggctacttcccccagggcgagagccgcgaccacccc
accaaattcccggccaaacagcgtttctacagcgacctgcaagtgttgctggagagccag
ttcaagaatgaccagccgctgctggtgatgggtgatgtgaacatttcgccgcaggattgc
gacatcggtatcggggcggacaacgccaagcgctggttgaagaccggcaagtgcagcttc
ctgcctgaagagcgcgagtggatggagcgcctcaagggctgggggctggtcgatacgttc
cgccatctgcacccggaggtggctgatcagttcagctggttcgactatcgcagccggggg
ttcgaggatgagcccaagcgtgggctgcggattgacctgatcatggcttcgcagggattg
ctgcctcgggtcaaggcggcggggattgactatgagttgcgggggatggagaagccttcg
gatcatgcgccgatttggcttgagttggggtga
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