Pseudomonas sichuanensis: LOY51_15295
Help
Entry
LOY51_15295 CDS
T08582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY51_15295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psih03021
]
LOY51_15295
Transcription machinery [BR:
psih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOY51_15295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_28
Sigma70_ECF
HTH_23
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UVL87165
LinkDB
All DBs
Position
complement(3406115..3406615)
Genome browser
AA seq
166 aa
AA seq
DB search
MHALDSTPLHQLYQAHSGWLKTWLRTRLGNTADAADLAQDTFLRVLAARNAEAIREPRTY
LSSIARALMIDRFRRQAVEQAYLDVLALRPEPMDISPETRLLIIETLTEVDAMLDNLGER
TRTIFLAVQLEGLSYVAAGERFGVSVTTVKKHMIRALTNCLLLAQG
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctctcgattcgacccctcttcatcagttgtatcaggcgcacagcggctggctg
aaaacttggttgcgcacgcggctgggcaataccgctgatgccgcggacctagctcaggat
actttcctgcgggtactggcagcgcgcaatgccgaggcgattcgtgagccgcggacctac
ctaagctccatcgctcgagcgctgatgatcgaccgctttcgccgccaggcggtagagcag
gcctatctggatgtgctggcgctgcgccccgagccgatggacatttcgccggaaacccgc
ctgcttatcattgaaacgctgactgaagttgacgctatgctcgacaatctcggcgaacgt
acccgcacgatctttcttgccgtgcaattggaaggtctgagttacgtagcggcgggcgag
cgctttggcgtgtcggtgaccaccgtaaaaaaacacatgattcgcgccctcaccaactgc
ctgttgttggctcagggttga
DBGET
integrated database retrieval system
