Pseudomonas sichuanensis: LOY51_15360
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Entry
LOY51_15360 CDS
T08582
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
LOY51_15360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
DUF5816
Motif
Other DBs
NCBI-ProteinID:
UVL87178
LinkDB
All DBs
Position
3424209..3430406
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AA seq
2065 aa
AA seq
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MLYQKNYFSALTTNLSIRSERAAQGLLSLGNPHLRQFLHDQLTASPGTPGAWLADPVFEP
TFGWDESDETMSSLAGGSLLHRRLAEAMASPPKDLAQEYSFPGDRHLFTHQLAAWKILNS
PERKSLVVTSGTGSGKTECFLVPVLNHLAKEIEAGEDPEGVRALFIYPLNALINSQQNRL
DAWTDGFGGQIRHCLYTGALENERKASDQQYKGQVIDRKSLRERPPQMLVTNATMLEYML
IRKDDEPILKKSAGKLRWIILDEAHTHIGSQAAEMALLLRRVMLAFKVEAKDVRFVATSA
TFGSDEKTIESLREFLADIGGVAPEQVEVVQGHRDIPGLLDVTPDAKHDQPAAIAAIDAE
QEQSAPRYQRLESSPTARRLRSLFIPAGQVKPQSLKGMTRESDLSPVQLLAWLDLMSGTK
NAAGISFLPLRAHLFHNVIPAIRACVDRNCTHKASTALNHADWPFGMVYTEERTHCNCGA
PLMPLVSCEECNESFLQAVATNHGKLIDPSQQQVDEFSLDEETADTNDPTEDRISLTQTL
ITNRPVNYSYPEFLDPTSQKLMFDGPKDGYIGLQLFSSNKNECPCCGATIQGRSLLRPAR
IGTPFTLSTVIGTLLEFCTSDSMPTGKPFQGRKLISFTDSRQGTARIAVKLQQDSERNRV
RGLVYHRLLQAQPACTLSGEEQHELHELLELEAAEKLGRFEQKYLQQLLEKQAEYAKGAE
ISWTDMVNHLAGTPELQMAMLDYYHSLAPKTFGKQDSIALASMLLAREFYRRPKRANSLE
TLGLVQVCYPKLASISSKPMAWPAHQTVESWRSYLKVLLDFFVRENTALNIDKRWQSLIG
AKVSPKWVVEPIFDGKADKLSRRYTRWPAVNTVNGIQSRAILMLCKAFNYSTSTHRDQID
SILREAWHALTQQTKLLISSGDGYQLDLKDVSFRLPNEVYLCPVSRRFIDTPFEQLSPYT
PRTDRNMVINVLPYTLPRPPEALLHISGDDGLLAIREWLNQHPDIQQLRKAALWSDVMDL
VIEGGNYFRAAEHSAQQSKSKLDVYEALFKTGKLNLLSCSTTMEMGVDIGGISVVAMNNV
PPHPANYLQRAGRAGRRREGRSLALAVCKNTPHDQSVFNSPLWPFNTPMRMPKVSLQSPD
LIQRHVNAWLLSHWLKHVVTAQEIKSMTAGTFFLEGEMPMSLATRFCLWCNNQASKVEPL
VAQALKDITCRSILDSTPQPALLKRTSTNLSGITQAWQQEHSASYAQLQQIDDKKAAASR
AMEAQLSRIEKEYLLSELANRRFLPGYGFPTDIVSFDNRCMQTLKQEETDKREDNRARYR
SLASRDRITGLREYAPGAELVMDGLVYKSSGITLNWHAPASAENVKELQLFKKAWFCRHC
GASDAAINPGLEINCQECGAPIGREDIREYLVPAGFAVDFFDEPHNDISQLQYVPVQAPW
LNVPANWICLANPAFGQFRFSQQAHLFHYTSGASQKGFAICLECGKAEPMLSHPDTAAPA
NEQHLPAIFRQKAEHKRLRGGKSDDGENICPGSHNNWKIKQGIHLGHDSLTDALELVLRN
PSSGELLYDDVSGYSIAVALREAIAAELGVQTEELGCDCRPIRVDGYPASAIRVFDLRSG
GYTTQAAERLNESSLWQRVISRLDSCNCTHACQRCLLSFDTRFEADRLDRHAALAWINQA
WLAGLALPTELAVFGPQSRAEISTLQEAVEQALTQDDTAKTLAVYLSAPAEDWDLAVARR
LRHQLQSWEAAGHQVQLHILDSTYAALPADQKEWLVRLTFSGIQICLHETMPDLGALALN
ITLQGPRCNTAWASDNVHLTIPGHTWDLAAAGARIVRGAPPALLSDRILNAPDLMPTTTP
GLIKVEIGGQLDGSLSGFAKRFWEHLRNEAGSILDEALSGDDPITELVYSDRYVCSPLVV
NQLVNVVHELGRVSATNFAIRIQGRQYQKDDNRAPWQCRHDWHSSRERDDAICQALEYCG
LSGEVLSLSSLPHFRQLHLQLRSGKKLTVQLDQGLSYWEADRSEKSYMLKFDFATNQLGE
EILEHIRCRVVAASDENTQVFLSVT
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaaagaattatttttccgccctgaccaccaacctcagcatccgcagtgaa
cgtgcggctcagggcctgctcagccttggcaatccccatctgcgtcagttcctacatgat
cagctgaccgcatctcccggaactccgggtgcctggcttgcggatccggttttcgagccg
acctttggctgggatgaaagcgatgaaaccatgagttctctggcaggaggcagcttgctg
caccgacgacttgccgaggccatggcttccccgcccaaggatcttgcccaggagtactcc
ttccccggcgaccgccatctattcacccatcaattggcggcctggaaaatcctcaacagt
ccggagcggaaatctctggtggtgaccagcggcaccggttcgggcaagaccgaatgcttt
ctggtgcccgtcctcaaccatttggcaaaagagatcgaggctggtgaagacccagaaggt
gttcgcgccctgtttatctacccgctgaacgcgctgatcaactcgcagcaaaaccgcttg
gatgcctggaccgatggttttggcggccagattcgacactgtctgtacaccggcgccctg
gaaaatgaacgtaaggcttcggaccagcagtacaaaggtcaggtaatcgaccgtaagagc
ctgcgcgaacgtccgccacagatgctcgtaaccaatgccaccatgctggaatatatgctc
atacgcaaagacgatgagcccatcctgaagaaatctgcgggcaaactgcggtggatcatt
cttgacgaggcgcacacccatatcggctcccaggctgccgaaatggcactattgctacgg
cgtgtgatgcttgccttcaaggttgaagcgaaggatgtgcgttttgttgcgacttcggcc
acttttggctcggatgaaaagaccatcgaaagcctgcgcgaattcctcgctgacataggc
ggagttgctccggaacaggtagaggtagtgcagggccatagggatatccccggcctgttg
gatgtgacgcccgatgccaagcatgaccagcctgccgccattgcagccatcgatgccgag
caggaacaatccgctccgcgctaccagcgcctcgagtccagcccgacagccaggcgtcta
cgttccttgttcattcctgcgggacaagtgaaaccacaaagcctaaaagggatgacccgg
gagtccgatctaagtcctgtccaactgctggcctggctggatttgatgtcaggcaccaag
aatgccgctggcatttccttcctgccattacgtgcccatctcttccataacgtgatccca
gcgatccgagcctgcgtggaccgtaactgtacacacaaggccagcaccgcactcaaccat
gccgactggccatttggcatggtgtatacggaggagcgaacccattgcaactgcggcgcg
ccgctcatgccgctagtttcctgtgaagagtgcaacgagagtttcttgcaggctgttgct
accaaccatgggaaactgatcgacccatcacaacagcaggtcgatgaattctccttggac
gaggaaactgccgatacaaatgatccgactgaagaccgcatctcactaacccaaaccctg
ataaccaaccgaccagtcaactacagctacccggagtttctggatcctaccagccagaag
ctgatgttcgacggccccaaggacggatacatcgggctgcagctattcagcagcaacaaa
aatgaatgcccatgctgtggtgcaaccattcaagggcgcagcctattgcgccccgcacgt
attggcacccccttcaccctgagcacagtgattggaaccctgctggagttctgcacgtca
gactcgatgccgacaggcaagccgttccagggccgcaagctgatctccttcactgacagc
cgccaaggtaccgctcgtattgcggtcaagctgcagcaggactccgagcgcaacagagtt
cgaggactggtttatcaccgccttttgcaagcgcagcccgcctgcactctatcaggggag
gaacagcacgaactgcatgagctgctggaacttgaggcagcggagaaattggggcgcttc
gagcaaaagtacttacaacagttgctggaaaagcaggctgaatacgccaaaggtgcagaa
atcagctggaccgatatggtcaaccatctggccggcacgccggagctgcagatggccatg
ctggactattatcacagcctcgccccgaagacttttggcaagcaagacagcatcgcccta
gccagtatgcttctcgcacgcgagttctatcgccgaccaaaacgtgccaatagcttggaa
acactgggactggtgcaggtttgctatcccaagctggcaagcatcagcagcaagcccatg
gcctggcctgcgcaccagacggtcgagtcctggcgctcttatctgaaggtgctgttggac
ttcttcgttcgtgaaaacaccgctctgaatatcgacaagcggtggcaatcgctgatcggc
gccaaagtcagtcccaagtgggtggtagagcctattttcgatggtaaggcggacaagctt
tcccggcgttacacgcgctggccggcagtcaataccgtcaatggcattcaatcacgcgca
atcctgatgctctgcaaggctttcaactactccacgtctacacacagggatcaaattgac
tcgatcctgagggaagcctggcatgcacttacccagcagacgaagctgctgatttcgtcc
ggcgacggatatcagcttgatctcaaggacgtgagctttcgtctgcccaacgaggtctat
ctctgccctgtatctcggcgctttatcgacacgccgtttgagcagctcagcccttacacc
ccccgtaccgaccgtaacatggtcataaatgtgttgccctacaccttgccccgcccaccg
gaagcccttctgcatatttccggcgatgatggactgctggcgatccgcgaatggctaaat
cagcaccctgatattcagcagcttcgtaaagctgctctctggtcggacgttatggatctg
gtcattgagggcggaaactatttccgtgcagccgagcactcggcccaacaatccaaaagc
aaactggatgtctacgaagccctgttcaagacaggcaagctgaacctgcttagctgttcg
accacaatggagatgggggtagacatcggcggcattagcgtggtggccatgaataacgtc
ccaccgcacccagccaactacctgcagcgggctggccgtgcaggccgccgccgcgaagga
cgctctctggccttggccgtctgcaagaataccccgcatgaccagagcgtgttcaacagc
ccactctggcccttcaacacccccatgcgcatgcccaaggtgtctctgcaaagccccgat
ctgatccagcgtcacgtcaatgcctggttgctctcgcactggctcaagcacgttgtcaca
gcccaggaaatcaagtcgatgactgctggcacgttcttcctcgaaggcgaaatgcccatg
tcgctggcgactcgtttctgtctgtggtgcaacaatcaggcaagcaaagtggagccactg
gtggctcaggccctcaaagacatcacttgtcgcagcattcttgattcaactccgcagcct
gcactgcttaagcgcaccagcaccaacctgagcggaatcacgcaggcatggcaacaggag
cactcggccagctacgcgcaactgcagcagattgacgacaagaaagccgcagcctcccgc
gccatggaagcccagctcagtcgcattgagaaggaatacttactcagcgagctggctaac
cggcgcttcctgccggggtatggcttcccgacggacatcgtcagcttcgacaatcgctgt
atgcagaccctgaagcaggaagaaactgacaaacgcgaggacaaccgcgcccgctatcgc
tcgctggcatctcgagaccgtatcaccgggctacgcgaatatgcaccaggagccgaactg
gtcatggacggtctggtctacaaatcatccggcatcacactgaactggcacgccccggca
tctgccgaaaacgttaaggagctgcagctcttcaaaaaagcttggttctgccgtcattgt
ggggccagcgacgccgcaatcaacccaggactggaaatcaactgccaggaatgcggtgcc
cctatcggacgggaggatatccgggagtatctggtgcctgcaggctttgccgtggacttc
ttcgacgaaccgcacaatgacattagccagctgcaatatgtgcctgtccaggctccgtgg
ctgaatgtacctgctaactggatctgcctggccaacccggcattcggtcagttccgcttc
agtcagcaggcccacctgttccactacacctcaggagccagccagaagggcttcgccatc
tgtcttgagtgcgggaaagcagagcccatgctaagccatcccgatacggctgctccagcc
aacgaacaacatctgccagccatcttccgccagaaggcggaacacaaacgcctgcgcggc
ggcaagagtgacgatggggagaatatctgccccggcagccacaacaactggaaaatcaag
caaggtatccacctaggccatgacagtctcaccgatgcgcttgagttggtactacgcaat
ccctccagcggtgagctcttgtacgatgatgtctctggctattcgatcgcggtagcactt
cgggaagcgatcgcagcggaactgggcgtgcaaactgaggagttgggttgtgactgccgc
ccgatcagggttgatggctatcctgccagtgccatccgggtcttcgacctgcgtagcggt
gggtacaccacacaggcagcagagcgactgaatgagtccagcctgtggcagcgggttatc
agccgtctcgacagctgcaactgcacgcatgcctgccagcgttgcttactcagcttcgac
actcgctttgaggctgatcgcctcgatcgccatgccgcactggcatggatcaatcaggcc
tggcttgccgggctggcactgccaaccgagctcgcggtcttcggcccgcaaagccgggcg
gaaatttccaccctacaggaagccgtcgagcaggctctcacccaggacgacactgcgaag
acccttgctgtttatctctcggctccagccgaagactgggatctggccgtcgcacgccgt
ctgcgacatcaactgcaaagctgggaagcagccgggcatcaggtgcaattgcacatactg
gatagcacctatgcagccctgccagctgaccagaaggaatggcttgtaagactcaccttc
agcggcatccagatctgcctccatgagaccatgccggatcttggtgctctagcgctgaac
atcaccctgcaggggccgcgatgcaacaccgcctgggccagcgacaatgtgcacctgact
atcccgggccatacttgggatctagctgcggccggtgcgcggattgttcggggagcacca
cccgcgctgctatcagatcgaatactgaatgcacctgacctgatgccaaccacaaccccc
ggcctgatcaaggttgagatcggaggtcagttggatggttcgctcagcggctttgccaaa
cgcttctgggaacatctcagaaatgaggcaggtagcatcctagacgaggcattgtcaggc
gatgaccctattacagagctggtctacagtgatcgatatgtatgcagcccgctggtcgtg
aaccagttggtcaacgttgttcatgagcttggacgagtcagtgctaccaacttcgccatc
cgcatccagggtcgccagtaccaaaaggatgacaaccgggcgccatggcaatgccggcat
gactggcactcatctcgcgagcgcgacgatgccatctgccaagcattggaatactgcggc
cttagcggcgaggtgctcagcctttcgtccttgccgcacttccgccagttgcacctgcaa
ctccgctccggcaaaaaactgacggtccagcttgatcagggactttcgtattgggaggcc
gaccgtagcgagaagtcctatatgctcaaattcgacttcgcaacgaatcaacttggagag
gaaattctggaacatatccggtgcagggttgtagctgccagcgatgagaacacccaggtt
ttcctttccgttacctga
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