KEGG   Pseudomonas sichuanensis: LOY51_19350
Entry
LOY51_19350       CDS       T08582                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
psih  Pseudomonas sichuanensis
Pathway
psih02020  Two-component system
psih02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LOY51_19350
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LOY51_19350
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psih02022]
    LOY51_19350
   02035 Bacterial motility proteins [BR:psih02035]
    LOY51_19350
Two-component system [BR:psih02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   LOY51_19350
Bacterial motility proteins [BR:psih02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    LOY51_19350
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 MCM HTH_20 HTH_30 FleQ MerR AAA AAA_2 AAA_19 HTH_24 AAA_3 Mg_chelatase HTH_23 HTH_28 AAA_22 nSTAND3 HTH_11 DUF2249 PDE8A_N Sigma70_r4_2 AAA_7 HTH_1 HTH_17 HTH_Mga nSTAND6 ATPase TIP49 Myosin_head
Other DBs
NCBI-ProteinID: UVL87924
LinkDB
Position
complement(4285732..4287102)
AA seq 456 aa
MAIKVLLVEDDRVLRQALCDTLEIGGFAYQAVGSGEEALEAVLKEVFSLVVSDVNMPGMD
GHQLLARLRRQQPQLPVLLMTAHAAVERAVEAMRQGAADYLVKPFEPKALLTLVERHAAG
RVADDEGPVACELASRQLLELAARVARSDSTVLISGESGTGKEVLARYIHRQSPRAQAPF
VAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEVSEMPLGLQAKL
LRVLQEREVERVGGRKPIALDIRILATTNRDLAGEVAAGRFREDLYYRLSVFPMAWQALR
ERPADIVPLAERLLARHARKMCHAQVRLSAQAQASLQAYAWPGNVRELDNAIQRALILQQ
GGVIEAADFCLAGAIPLSPSNEATIAPSCLDSGAEAGGLEGDMRRHEFQMIIDTLRAERG
RRKEAAERLGISPRTLRYKLAQMRDAGFDVEASLFG
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaatcaaggtgctgctggtcgaggatgatcgcgtcctgcgacaggcgctgtgcgac
accctggaaatcggcggcttcgcctaccaggccgtgggcagtggcgaagaagcgttggag
gcggtgctcaaagaggtgttcagcctggttgtcagcgatgtgaacatgccgggtatggac
gggcaccagttgttggccaggctgcgccgccagcaaccacagctgcccgtgttgctgatg
actgcgcacgctgccgtggagcgggccgtcgaagcgatgcgccagggcgctgccgattac
ctggtcaagccgttcgagcccaaggcgttgctcaccctggtcgagcgccatgctgccggg
cgtgtggctgatgatgagggcccggtggcctgcgagctggccagccgacagttgctggag
ctggcggcgcgggttgcgcgcagcgactcgaccgtgctgatctcgggcgagtccggcact
ggcaaggaagtgctggcacgctacatccaccggcagtcgccacgggcacaggcgccgttc
gtggcgatcaactgcgcggccatccccgacaacatgctcgaggccacgctgttcggtcat
gaaaagggcgccttcaccggcgccatcgctgcccaggccggaaagttcgagcaggccgaa
ggcggcaccttgctgctggatgaagtttcggaaatgccgctggggctgcaggccaagctg
ctgcgcgtgttgcaggagcgcgaggtcgaacgcgttggcgggcgcaagcccatcgccctg
gatatccgcattctcgccacgaccaaccgtgatctggcaggggaagtggcggcggggcgc
ttccgcgaagacctctactatcgcctgtcggtattccccatggcctggcaggccctgcgc
gagcgcccagccgatatcgtgccgctggccgagcgcctgctggcgcgccatgcccgcaag
atgtgccatgcccaggtgcgcttgtccgcccaggcgcaggctagcctgcaggcctatgcc
tggccgggtaacgtgcgtgagctggacaacgcgattcagcgcgcactgattctgcagcag
ggcggcgtgatcgaggcggcggatttctgtctggctggcgccattccgttgtcgccttcg
aatgaggccactattgcgccatcatgcctggattcaggcgccgaggcgggtggactggag
ggcgacatgcgccgtcacgaattccagatgatcatcgacaccttgcgcgccgagcgcggg
cgtcgcaaggaggccgccgaacgtctgggcatcagcccgcgtacgctgcgctacaagctg
gcgcagatgcgtgacgccgggttcgatgtcgaggccagcctgttcggctga

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