Pseudomonas sichuanensis: LOY51_19930
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Entry
LOY51_19930 CDS
T08582
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
psih
Pseudomonas sichuanensis
Pathway
psih02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LOY51_19930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psih02000
]
LOY51_19930
02044 Secretion system [BR:
psih02044
]
LOY51_19930
Transporters [BR:
psih02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LOY51_19930
Secretion system [BR:
psih02044
]
Type I secretion system
Adhesin protein transporter
LOY51_19930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_22
AAA_33
TMEM135_C_rich
AAA_16
AAA_29
DUF87
RTX
eRF1_3
AAA_18
ATP-synt_ab
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UVL91965
LinkDB
All DBs
Position
4418529..4420664
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AA seq
711 aa
AA seq
DB search
MQSTQPRLDVDDPLLDGLLILCKLHGCPASRASLCSGLPLAEQRLGLALLPRAAARAGLQ
ARVLQRSLDAISPLNLPVLLILNDGRSAVLQRWADDGRALLLPCEAEGGEQWVEREALAE
AYSGQALFARPRHTLEDVRAPLIPRVNAWFRDTLRHSRWLYGDALLASLLINLLGLMVPL
FVMQTYDRVVPNQALSTLWVLVAGLFIGTAFELVLRMVRAHLLDQAGKKTDLILSATLFE
RITGMSMKARPATIGGFAQSIHDFQGLREFLTAVTLTSIIDLPFVALMLVVIGLLGGWLV
LIPLIAFPVAMALALFIQARLRDTVQKSLSLGAVRQALLIETLGGLETLKACGAESERQY
QWEHTNGAITRLDAHARNLSSLATNGTLFIQQFCGMATIVAGVYSIIAGNLSVGALVASY
MLGSRVLAPLGQIAGLITRYQQAQLTMQSTDALMSLPQERQADRLALEHTTLHGGVSISH
VTFRYPGQAAPALNDVSFTLKAGERIGVIGRSGSGKSTLARLLMGFHHPDEGQVLLDNLD
LRQLDIADLRNQIGYVAHDLPLLAGSLRDNLTLGARHVSDARMLEVAELTGVSDLARQHP
QGFERPVGERGQLLSGGQRQAVLLARALLLEPPILILDEPTSHMDNSSEEQLRQRLANWV
PGKTLLLVTHRTSMLSLVDRLLVLDNGKIVADGPKDAVIDALRKGRIGSAL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcacccaaccgcgcctggatgtggatgatccgttgctcgatggcttgctgatc
ctgtgcaaactgcatggctgccccgccagccgcgccagcctgtgcagcggcctgccgctg
gccgagcaacgcctggggttggcgctgctgccgcgcgctgccgcccgtgccgggttacag
gcgcgggtgctgcagcgctcgctggacgccatctcgccgctcaacctgcccgtgctgttg
atcctcaacgatggccgcagcgccgtgctgcaacgttgggcggatgacggccgggcgttg
ctgctgccgtgcgaggccgaaggcggtgaacaatgggtcgagcgcgaagcactggccgag
gcctacagcggccaggccctgttcgcccgcccccgccacaccctggaagacgtacgcgcg
ccgctgattccgcgggtcaacgcctggttccgcgacaccttgcgccattcccgctggctg
tacggcgacgcactgctggcgagcctgctgatcaacctgctggggctgatggtgccgctg
ttcgtcatgcagacctacgaccgcgtggtccccaaccaggcgctgtcgaccttgtgggta
ctggtcgccggcctgttcatcggcaccgccttcgagctggtgctgcgcatggtccgcgcc
cacctgctggaccaggccggcaagaagaccgacctgatcctgtccgccaccctgttcgaa
cgcatcaccggcatgagcatgaaagcccgcccagccaccatcggtggttttgcccagagc
atccacgatttccagggcctgcgcgaattcctcaccgccgtgacgctgaccagcatcatc
gacctgcccttcgtcgcgctgatgctggtagtgatcggcctgcttggcggctggctggta
ctgatcccgctgatcgccttcccggtggccatggccctggcgctgttcatccaggcgcgc
ctgcgcgacaccgtgcaaaagagcctgagccttggcgccgtgcgccaggccctgttgatc
gaaaccctcggcggcctggaaacactcaaggcctgcggcgccgaaagcgagcgccagtac
cagtgggagcacaccaacggcgccatcactcgcctcgacgcccacgcccgcaacctgtcg
tccctggccaccaacggtacgctgttcatccagcagttctgcggcatggccaccatagtc
gccggcgtctacagcatcatcgctggcaacctcagcgtaggcgccctggttgccagctac
atgctgggcagtcgcgtgcttgccccgctgggccagattgccgggttgatcacccgctac
cagcaggcgcagttgaccatgcaaagcaccgatgcgctgatgagcctgccgcaggagcgc
caggcggaccgcctggcactcgaacacaccacactgcacggcggcgtgagcatcagccac
gtcaccttccgctacccaggccaggctgcccctgccctcaacgacgtgagcttcaccctc
aaagcgggcgagcgcatcggcgtcattggccgcagcggttcgggcaagagcaccctggcg
cggctgctgatgggcttccatcaccccgacgagggccaggtactgctggacaacctcgac
ctgcgccaactggacattgccgacctgcgcaaccagatcggctacgtcgcccatgatctg
ccgctgctggccggcagcctgcgcgacaacctcaccctcggtgcgcggcatgtcagcgat
gcacgcatgctcgaagtggccgagctgaccggcgtcagtgacctcgcccggcagcacccg
caaggtttcgagcgcccggtgggcgagcgcggccaactgctctccggcggccagcgccag
gccgtgctgctggcccgggcactgttgctggaaccaccgatcctgatcctcgacgaaccc
accagccacatggacaacagcagtgaggaacaactgcgccagcgcctggcgaactgggta
ccgggcaagactctgctattggtcacgcaccgcacctcgatgctcagcctggtggaccgg
ctgctggtgctggacaacggcaagatcgtcgccgacgggccgaaagatgcggtgatcgat
gcactgcgcaagggtcgtatcggttcggctttgtag
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