Pseudomonas sichuanensis: LOY51_20085
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Entry
LOY51_20085 CDS
T08582
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih00061
Fatty acid biosynthesis
psih00071
Fatty acid degradation
psih01100
Metabolic pathways
psih01212
Fatty acid metabolism
psih02024
Quorum sensing
psih04146
Peroxisome
Module
psih_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LOY51_20085 (fadD2)
00071 Fatty acid degradation
LOY51_20085 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LOY51_20085 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOY51_20085 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psih01004
]
LOY51_20085 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psih04147
]
LOY51_20085 (fadD2)
Enzymes [BR:
psih01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LOY51_20085 (fadD2)
Lipid biosynthesis proteins [BR:
psih01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LOY51_20085 (fadD2)
Exosome [BR:
psih04147
]
Exosomal proteins
Exosomal proteins of breast milk
LOY51_20085 (fadD2)
Exosomal proteins of breast cancer cells
LOY51_20085 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UVL88059
LinkDB
All DBs
Position
complement(4457995..4459683)
Genome browser
AA seq
562 aa
AA seq
DB search
MQADFWNDKRPAGVPSTLDLTAYASVVDVFERSCKRFADRPAFSNLGVTLSYAELERHSA
AFAAWLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGSRVQEVLPDTGIEYLIEAKMGDLLPTAKGWLINTVVDKLKKMVPAYQ
LPQAVSFKQVLRLGRGLTHKPVPQVHEDIAVLQYTGGTTGLAKGAMLSHGNLVANMLQVL
ACFAQHGPDGQPLIKEGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDISGFI
KELGKWRFSALLGLNTLFVALMDHPGFKSLDFSALKVTNSGGTALVKATAERWEALTGCR
IVEGYGLTETSPVASTNPYGQLARLGTVGIPVVGTAFKVIDDEGNEQPLGERGELCIKGP
QVMKGYWQQPQATAQALDAEGWFKTGDIAIIDPDGFTRIVDRKKDMIIVSGFNVYPNEIE
DVVMNHPQVASCAAIGVPDERSGEAVKLFVVPRAGGLSVDELKAYCKANFTGYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgatttctggaacgacaagcgcccggcgggcgtgccttccacactggatttg
acggcctatgcgtccgtcgtcgatgtcttcgaacgctcctgcaagcgcttcgctgaccgc
ccggcattcagcaacctgggcgtgacgctcagctatgccgagctcgaacgccactccgcg
gccttcgccgcttggctgcagcagcataccgacctggtaccgggcgaccgcatcgcggtg
cagatgcccaacgtgctgcagtaccccatcgccgtgttcggcgccctgcgtgccgggctg
gtggtggtcaacaccaacccgctgtacaccgcacgcgagatgcgccaccagttcaaggac
tccggggcccgcgcgctggtctacctgaacatgttcggcagccgcgtgcaggaggtattg
cccgacaccggcatcgagtatctgatcgaggcgaagatgggcgatctgctgcctactgcc
aagggctggttgatcaataccgtggtcgacaaactgaagaagatggtgcccgcctaccag
ttgccccaggccgtgtcgttcaagcaggtgttgcgcctggggcgtgggctgacccacaaa
ccggtgccgcaagtgcacgaagatatcgccgtgctgcagtacaccggcggcactaccggc
ctggccaagggcgcgatgctcagccacggcaacctggtggccaacatgctgcaggtattg
gcttgcttcgcccagcacggccccgacggccagccgctgatcaaggaaggccaggaggtg
atgatcgcgccgctgccgctgtatcacatctatgcgttcaccgcgaactgcatgtgcatg
atggtcaccggcaaccacaacgtgctgatcaccaacccccgcgacatctcgggcttcatc
aaggagctgggcaagtggcggttctcggcgctgctggggctgaacacactgttcgtcgcc
ttgatggaccaccccggcttcaaatccctggatttttccgcactcaaggtcaccaactcc
ggcggtacggcgctggtcaaggccaccgccgagcgctgggaggccttgaccggctgtcgc
atcgtcgaaggctacggcctgaccgagacgtccccggtggccagtaccaacccttatggc
caactggcgcggttggggacggtgggtatcccggtggtcggtacggcattcaaggtgatc
gacgacgagggtaacgagcagccgctgggtgagcgcggcgagctgtgcatcaaagggccg
caggtgatgaagggctactggcagcaaccgcaagccacggcccaggcgctggatgccgaa
ggctggttcaagaccggcgacattgcgatcatcgacccggacggcttcacccgcatcgtc
gaccgcaagaaggacatgatcatcgtctcgggtttcaacgtgtaccccaacgaaatcgag
gacgtggtgatgaaccacccgcaggtggccagctgtgcggccatcggtgtaccggacgaa
cgatccggcgaggcggtcaagctgttcgtggtgccgcgcgcgggggggctgagcgttgac
gagctcaaggcttactgcaaggccaacttcaccggctacaaggtgcccaagcacatcgtg
ctgcgtgattcgttgccgatgacaccggtgggcaagatcttgcgtcgggagctgcgcgat
atcgcctga
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