Pseudomonas sichuanensis: LOY51_20525
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Entry
LOY51_20525 CDS
T08582
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih01501
beta-Lactam resistance
psih02020
Two-component system
Module
psih_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY51_20525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY51_20525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psih02000
]
LOY51_20525
01504 Antimicrobial resistance genes [BR:
psih01504
]
LOY51_20525
Transporters [BR:
psih02000
]
Other transporters
Pores ion channels [TC:
1
]
LOY51_20525
Antimicrobial resistance genes [BR:
psih01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
LOY51_20525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
UVL88136
LinkDB
All DBs
Position
4547252..4548532
Genome browser
AA seq
426 aa
AA seq
DB search
MRVMKWSMIALAVAAGTSQFAVASSQDESKGFLEDSKLNVKTRMLYFSRDFRNNDRDKDG
NRQSRVEETGLGFLGTYESGFTQGTVGVGVDAIGMLGLKLDSGKGRAGTGLFPTGSDGRS
QDDYSKGGGAVKFRVSDTVLKVGDQFTALPVFATDDSRLLPEIAQGGLITSNEIKGLTLH
AGRFTSLTAQAETNRDSLHLKEADVLGGTYAFTDTLSTSLYYSKVEDYWRKYYANINWAL
PISDKQGLVFDFNIYDTKSDGAALVKAFDGDKLDNRAFSLSGAYNIGAHTFTLAYQKVTG
DGDYAYGVDGGGTIFLANSIARSDFNAEDEKSWQARYDLNFAEYGIPGLSFMTRYVRGTG
ANVTGTDNGKEWERDVDVKYVLQEGPAKDLSFRVRQATYRSSDGVYYGSSSIDELRLIVE
YPLSIL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgccctggcagtagcagcagggacctcgcagttt
gctgtcgcctcttcgcaggatgagtccaagggcttcctcgaagacagcaagctcaacgtc
aagacccggatgctgtatttcagccgtgacttccgcaacaacgatcgtgacaaagacggc
aaccgtcagagccgcgttgaagaaaccggcctgggcttcctgggtacctacgagtccggc
ttcacccaaggcaccgtcggtgtcggcgtcgacgccatcggcatgctgggcctgaaactg
gacagcggcaaaggccgcgccggcaccggcctgttcccgaccggttccgacggtcgctcg
caggatgactactcgaaaggcggcggcgcggtcaaattccgcgtatccgacaccgtgctg
aaggtcggcgaccagttcaccgcactgccggtcttcgccaccgacgacagccgcttgctg
ccagagatcgcccagggcggcctgatcaccagcaacgagatcaagggcctgaccctgcac
gccggtcgcttcaccagcctgaccgcgcaagccgagaccaaccgcgacagcctgcacctc
aaggaagctgacgtactcggcggcacctacgcctttaccgataccctgagcaccagcctg
tactactccaaggttgaagactactggcgcaaatactacgccaacatcaactgggcactg
ccgatctccgacaagcaaggcctggtgttcgacttcaacatctatgacaccaagagcgac
ggcgctgccctggtcaaggccttcgacggcgacaaactggacaaccgtgcattcagcctg
tccggcgcctacaacatcggcgcccacaccttcaccctggcctaccagaaggtcaccggt
gacggcgactacgcctacggcgtggacggcggcggcaccatcttcctggccaactccatt
gcccgttccgacttcaacgccgaagacgagaaatcctggcaggctcgctacgacctgaac
ttcgccgagtacggcattccaggcctgtcgttcatgacccgttacgtccgcggtaccggc
gccaacgtcactggcaccgacaacggcaaggaatgggaacgcgacgtagacgtcaagtac
gtgctgcaggaaggcccggctaaagacctgagcttccgcgtccgtcaagctacctaccgc
tccagcgatggcgtttactacggttcgagctcgatcgacgaactgcgcctgatcgtcgag
tacccgctgagcatcctgtaa
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