Pseudomonas sichuanensis: LOY51_20980
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Entry
LOY51_20980 CDS
T08582
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psih03016
]
LOY51_20980 (tcdA)
Transfer RNA biogenesis [BR:
psih03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LOY51_20980 (tcdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
3HCDH_N
Pyr_redox_2
DAO
ELFV_dehydrog
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UVL88218
LinkDB
All DBs
Position
complement(4637482..4638291)
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AA seq
269 aa
AA seq
DB search
MSTEDPRFAGVARLYGDDGLQRLRQAHVAIVGIGGVGSWAAEALARSGVGEISLFDLDDV
CVSNTNRQAHALDGQVGRPKVEVMAERLRAINPACTVHAVADFVTRETMAEYITEQMDCV
IDCIDSVMAKAALIAWCKRRKIAIITTGGAGGQIDPTRIQVGDLNKTFNDPLASRVRSTL
RRDYNFSRNTSRNYQVPCVFSSEQLRYPKGDGSVCLQKSFVGEGVRLDCSGGFGAVMMVT
ATFGMVAASKAVEKLVAGARRPAERVKAE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaagatccacgctttgccggcgtcgcccggctgtacggcgatgacgggctg
caacgcctgcgccaggcccatgtggccatcgtcggcatcggcggggtgggctcgtgggcg
gccgaggccctggcacgcagcggcgtgggtgagatcagcctgttcgacctcgacgatgtc
tgcgtcagcaacaccaaccgccaggcccatgccctggacggccaagtggggcggcccaag
gtcgaggtgatggccgaacgcctgcgggcgatcaacccggcctgcacggtgcatgcggtg
gccgacttcgtcacccgcgagaccatggccgagtacatcaccgaacagatggattgcgtg
atcgactgcatcgacagcgtgatggccaaggccgcgctgattgcctggtgcaagcggcgc
aagatcgccatcatcaccacaggtggcgcgggagggcagatcgacccgacgcgcatccag
gttggcgacctgaacaagaccttcaacgacccgctggcttcgcgggtgcgctcgaccctg
cgccgggactacaacttctcgcgcaataccagccgcaattaccaggtgccctgcgtgttc
tccagcgaacagctgcgctaccccaagggcgacggcagcgtgtgcctgcagaagagcttc
gtcggtgagggcgtacgcttggattgttcgggcggttttggcgcggtgatgatggtgacc
gcgacgttcggcatggtggcggcgagcaaggcggtggagaagctggttgccggcgcgcgg
cggccggcggagcgggtcaaggcagaatag
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