Pseudomonas sichuanensis: LOY51_21075
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Entry
LOY51_21075 CDS
T08582
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03410
Base excision repair
psih03430
Mismatch repair
psih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOY51_21075 (recJ)
03430 Mismatch repair
LOY51_21075 (recJ)
03440 Homologous recombination
LOY51_21075 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_21075 (recJ)
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LOY51_21075 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOY51_21075 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LOY51_21075 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UVL88236
LinkDB
All DBs
Position
complement(4660778..4662487)
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AA seq
569 aa
AA seq
DB search
MRIEPRPLPSTLPFLGNLPPLLTRLYAARGVQSEAELDKGLARLLPYQQLKGIEAAVDLL
VEALDQRQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVEGVAAAKAAGLRVLVTDHHLPGQQLPDADAIVNPNQPGCAF
PSKSLAGVGVIFYVLMALRARLRSLGRYDSQPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLCDDAALALDMAQQLDGLNQDRKSIEQGMQREALAQLKDLPVESMPYGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVAGFHIRDALDAVAARHPALISKFGG
HAMAAGLSLPAENFPAFAEAFDEEVRRQLREEDLTGRLLSDGSLAVEEFHLDLARALRNA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVRLDGIAFGIDREVWPNPTVR
WVELAYKLDVNEFRGNESVQLMIAHMEAR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgccgtcgaccctgccattcctgggcaacctgccgccc
ttgctgacccgcctgtacgccgcccgtggcgtgcagtccgaagccgagctggacaaaggc
ctggcccggctgctgccgtaccagcagctcaagggcatcgaggcggcggtggacctgctg
gtcgaagccctggatcagcgccagcgcatcctcatcgttggcgacttcgacgccgacggc
gccaccgccagcaccgtcggtgtgctggggctgcgcctgctgggcgcggcgcatgtcgat
tacctggtgcccaaccggttcgaatacggctacggcctgacccccgagatcgtcgaagtg
gcgttgcagcgccagccgcagctgctgatcaccgtggataacggtatctccagcgtcgaa
ggcgtggcagcggccaaggcggccgggctcagggtgctggtcaccgaccaccacctgccg
ggccagcagctgcccgatgctgatgccatcgtcaacccgaaccagccaggctgcgcgttc
ccgagcaagtcgctggcgggcgtgggggtgatcttctacgtgctgatggccctgcgtgcg
cgcttgcgcagcctcggccgctacgacagccagccgcagccgaacatcggtgaactgctc
gacctggtcgcgctgggcagcgtcgccgacgtggtgccgctggatgccaacaaccgcatc
ctggtgcaccagggccttgagcgcatccgcgctggccgcgcccgtcccgggctcaaggcg
atcctcgaggtggcccgccgcgaccatcggcgcatcacctccaccgacctgggtttcatc
ctcggcccacggctcaacgccgccgggcgtctggacgacatgagcctgggcatcgaatgc
ctgctgtgcgatgacgcagcgctggcattggacatggcccagcaactggatggcctgaac
caggaccgcaagtccatcgagcagggcatgcagcgcgaagccctggcgcagctcaaggac
ctgccggtcgaatcgatgccctatggcctgtgcctgttcgatgccgattggcaccaaggg
gtgatcggtattctggcctcacgcctgaaggagcgttaccaccgaccgaccatcgctttt
gccgacgcgggcgagggcatgctcaagggctcggcgcgttcggtggcggggttccatatc
cgtgatgcgctggatgcggtggcggcgcggcacccggcgttgatcagcaagttcggtggg
catgccatggcggcgggattgtcgttgccggctgagaacttcccggcgtttgccgaggcc
ttcgatgaagaggtgcggcggcaactgcgggaggaggatctgaccgggcggttgttgtcc
gatggcagcttggcggtcgaggagtttcacctggacttggcgcgggctctgcgtaatgcc
gggccctgggggcagcactttcctgagccgttgttccatggggtgtttcagttggtcgag
cagcgggttgtcggtgagcggcacctgaaggtggtgctcaagagcgagtgtggttcggtg
cggttggatgggattgcctttgggattgatcgggaggtttggccgaatcctacggtgcgg
tgggtggagttggcttacaagttggatgtgaatgagtttcgtgggaatgagagtgtgcag
ttgatgattgctcacatggaggcgcggtga
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