Pseudomonas sichuanensis: LOY51_23330
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Entry
LOY51_23330 CDS
T08582
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_23330 (radA)
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOY51_23330 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
Rad51
GvpD_P-loop
AAA_22
AAA
SLFN-g3_helicase
RecA
nSTAND3
AAA_24
DUF7125
AAA_14
NTPase_1
ABC_tran
MCM
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UVL88658
LinkDB
All DBs
Position
complement(5188046..5189413)
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AA seq
455 aa
AA seq
DB search
MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSGRAGWAGQQAQIK
TLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATQMP
ALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIEAIIATARQEKPRVMVIDSIQTIFT
EQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGSIPTHDQDVFLNVVG
GVKVLETASDLALLAAVMSSLRNRPLAHDLLVFGEIGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgtttgtatggctgtaccgaatgtggcgcgactttccccaaatgg
gccggccagtgcggcgagtgcggcgcctggaacaccctggtcgagaccatgatcgaaagc
ggcggcgcggcggcccccagcggtcgggccggctgggccgggcagcaggcgcagatcaag
accctcgccgaggtcagcgtcgaagagatcccgcgcttcaccaccagcagcaccgagctt
gaccgggtgctcgggggtggcctggtcgatggttcggtggtgttgatcggcggcgacccg
ggcatcggcaaatcgaccatcctgctgcagaccctgtgcaacatcgccacgcagatgccg
gcgctgtacgtcaccggcgaagaatcgcagcagcaggtggccatgcgctcgcggcgcctg
gggctgccccaggaccagctcaaggtcatgaccgaaacctgcatcgaggcgatcatcgcc
actgcccgccaggagaagccgcgggtgatggtgatcgactcgatccagaccattttcacc
gagcagctgcaatcggccccgggtggcgtggcccaggtacgcgaaagcgcggcgctgctg
gtgcgctatgccaagcagagcggcacggcgatcttcctggtcggccacgtcaccaaggaa
ggttcgctggccggcccgcgcgtgctggagcacatggtcgacaccgtgctgtatttcgag
ggtgaatcggacgggcgcctgcgcctgctgcgggcggtgaagaaccgctttggcgcagtc
aacgaactgggcgtgttcggcatgaccgatcgcggcctcaaggaagtctccaacccttcg
gcgatcttcctcaaccgtacccaggaagaggtgcccggcagcgtggtgatggccacttgg
gaaggtacccggccgatgctggtggaggtgcaggcactggtcgatgacagccacctggcc
aacccgcggcgggtgaccctgggcctggaccagaaccgcctggccatgctgttggcggtg
ctgcaccggcacggcagcatccccacccacgaccaggatgtgttcctcaacgtggtcggc
ggggtcaaggtgctggagaccgcctctgacctggcgctgctggcggcggtgatgtcgagc
ctgcgcaaccggccgttggcccacgacctgctggtgttcggcgagatcggcctgtctggc
gaggtgcgcccggtgcccagcggccaggagcgcctcaaggaggccgccaagcatggcttc
aagcgtgccatcgtgcccaagggcaatgcgccgaaagaggcgccgccgggcttgcaggtg
attgccgtgacgcgtctggagcaggccttggatgcattgttcgaatag
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