KEGG   Pseudomonas sichuanensis: LOY51_23380
Entry
LOY51_23380       CDS       T08582                                 
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
psih  Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:psih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:psih03016]
    LOY51_23380 (trmA)
Enzymes [BR:psih01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     LOY51_23380 (trmA)
Transfer RNA biogenesis [BR:psih03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    LOY51_23380 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Methyltransf_12 Cons_hypoth95 Methyltransf_15 MTS pP_pnuc_1 DUF3410 PrmA RrnaAD TRM5-TYW2_MTfase DREV Ubie_methyltran
Other DBs
NCBI-ProteinID: UVL88667
LinkDB
Position
5198846..5199931
AA seq 361 aa
MSAVFDPTQYDAQLATKVARLRELLAPFAAPKPAVFDSPREHYRLRAEFRLWREDGQRHY
AMFAPGEKHKAILIDDFPIASQRINQLMPRLKAAWQGNEALNNRLFQVEFLTTLAGDAMV
TLCYHRPLDDAWEAAAQQLAAELNVSVIGRSKGKRLVIGRDYAVEKLDIAGRTFSYRQPE
GAFTQPNGAVNQKMLGWAFEAMGERDDDLLELYCGNGNFTLPLATRARQVLATEISKTSV
NAALHNLDENGVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKAYDFGTVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAQNIAQLHDTHRIERCALFDQFPYTHHMESGVLLVR
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagtgccgttttcgaccctacgcaatacgacgcgcagctggcgaccaaggtcgcccgc
ctgcgtgagctgctggcgccgttcgcggcgcccaagcctgcggtgttcgactcgccgcgc
gagcactaccgcctgcgcgccgagttccgcctgtggcgcgaggacggccagcgccattac
gcgatgttcgccccgggcgagaagcacaaggcgatcctgatcgacgacttccccatcgcc
agccagcgcatcaaccaactgatgccgcgcctgaaggccgcctggcagggcaatgaggcg
ctgaacaaccgcctgttccaggtggagttcctcaccaccctggccggcgatgccatggtc
accctgtgctaccaccgcccgctggacgacgcctgggaagccgctgcgcagcagttggcc
gccgagctgaatgtcagtgtcatcggccgctccaagggcaagcgcctggtgatcggccgt
gactacgcggtagagaaactggacatcgccggccgcaccttcagctatcgccaacccgaa
ggcgcgttcacccaacccaacggcgcggtgaaccagaagatgctcggctgggccttcgaa
gccatgggcgagcgcgacgacgacctgctggaactgtactgcggcaacggcaacttcacc
ctgccgctggccacccgggcccgccaggtgctggccaccgagatcagcaagacctcggtc
aacgccgcgctgcacaacctcgacgagaatggcgtggacaacgtgcgcctggtgcgcctg
tcggccgaagagctgacccaggcgctgaacgaggtgcgcccgttccgccgcctggaaggc
atcgacctcaaggcctacgacttcggcaccgtgttcgtcgacccgccgcgcgccggcatg
gacccggacacctgcgagctgacccggcgcttcgagcgcatcctgtacatttcctgcaac
ccggaaaccctggcgcagaacatcgcccagctgcacgatacccaccgtatcgaacgctgc
gcgctgttcgaccagttcccctatacccaccacatggaaagcggggtgctgctggttcgg
cgctga

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