Pseudomonas sichuanensis: LOY51_23550
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Entry
LOY51_23550 CDS
T08582
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOY51_23550 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_23550 (recC)
Enzymes [BR:
psih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LOY51_23550 (recC)
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY51_23550 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UVL88700
LinkDB
All DBs
Position
complement(5233551..5237033)
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AA seq
1160 aa
AA seq
DB search
MASTTSLHPGFMIVQGNRLDDLRNLVVSVMRRFPLAPLENEIALVQSNGIAQWLKLALAE
DPQDDDQGGCGIAAAIDVQLPGSFMWQLYRGVLGRDEIPEVSLLDKAPLTWRLMRLLPEV
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGHHVLNTARGE
RKPLAAGNRWQAELWRILLEDVGEEGMAQSRAGVHQRFIERINSLEQAPAGLPARLIVFG
ISSLPAQILEAMAGLARFSQVLLCVHNPCRHHWGDIVADKDLLRHQYKRQQRKQGMPMLL
DDELLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQSVFSDGRIDLFSDGDPKTLLNQL
QDDILELRPLAETREQWPQVDPAKDRSVRFHVAHSPQREVEILHDQLLARFSADPSLRPR
DIIVMLPAIDTYAPHIRAVFGQLERSDPRYIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFAIEESDLPTLHRWIEGAGIRWGLSARQRATLGLPEGLEQNS
WRFGLRRMLLGYAVGVGEGCDGIEPYDEIGGLDAALIGPLVALLDALDIACQALSQPATA
TQWGERLHALLQIFFLAENEHDELLLVQLQDLRDTWLETCEAVSLQDLLPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLAAGWQLTN
AKPGQKDDAGQQLLHALTQEHPLQPFSQRYFQKGSPLFSFAHEWLVLHQDAAEAQAAHAP
LLPYSSDEPLSLTQLQDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFALDALQRYGLSE
SLLGAALAEPDNPEQALQAQARRLQACGLLPLAGFGEALQAELIQPLPDLLQRHGQLLQR
WPTLVEGALPIHFEHGLHRLEGWLGRVYQADDQSLLSIATVPNTLSAGRNNLKWHRLIPA
WVMHLAACASGYPLHSALVASDLTLLLAPLPQGQAAERLGELLVARQAGMNAPLPVAAKT
AFAWLAQEDPDKALAAAARAYEGDGLISHGERSESLALARQYNDFAALVLDETFEGWCEA
LYRPLFAAPWQTLGNPESAQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacgacctcactgcacccaggtttcatgatcgtccagggcaatcgcctggat
gacctgcgcaatctggtggtgagtgtgatgcgccgcttccccttggcaccgctggaaaac
gaaatcgccctggttcaaagcaacggtatcgcccagtggttgaaactggcgctggccgag
gacccacaggacgacgaccaaggcggctgcggcatcgctgccgcgatcgacgtgcaactg
cccggcagcttcatgtggcaactgtatcgaggggtgctgggccgcgatgaaatccccgaa
gtgtcgctgctcgacaaagcccccctgacgtggcgcctcatgcgcctgctgccggaggtc
atcgagcgcccgcacttcgagcccctgcgccgcttcctcaccgacgacagcgacctgcgc
aaacgctatcagctggccgaacgcctggccgacctgttcgaccaataccaggtctaccgt
gccgactggctcaaggactgggctgccgggcaccatgtgctcaacactgcgcgtggtgaa
cgcaagccgctggctgccggcaaccgttggcaggccgagctgtggcgaatcctgctcgaa
gacgtaggcgaagagggcatggcccagagccgcgccggtgtgcaccagcgcttcatcgaa
cgtatcaatagcctggaacaagcgcccgctggcctgcccgcccgattgatcgtgttcggc
atctcatcgctgccggcccagatcctcgaggccatggccggtctggcacgcttcagccag
gtactgctgtgcgtgcacaacccctgccgccaccactggggcgacatcgttgccgacaag
gacctgctgcgccatcagtacaaacgccagcagcgcaagcaaggcatgcccatgctgctg
gacgacgagctgctgcaccagcatgcgcacccgctgctggccgcctggggcaagcagggc
cgtgactacatcaacctgctcgacagctacgacgaccccggcagctatcaatccgtgttc
agcgatggccgcatcgacctgttcagcgacggtgaccccaagaccctgctcaaccagctg
caggacgacatcctcgaacttcgcccactggccgaaacccgcgagcaatggccccaggtg
gaccctgccaaggaccgctccgtgcgcttccatgtggcccacagcccgcagcgcgaagtc
gagatcctgcacgaccagctgctggcccgcttcagtgccgaccccagcctgcgcccgcgc
gacatcatcgtcatgctcccggccatcgacacctacgccccgcacattcgcgcggtgttc
ggccagctggagcgcagcgacccacgctacatccccttcaccctgaccgaccaaggccaa
cgcggccgcgatcccttgctgatcgccctcgaacacttgctgaagctgcccgacagccgt
tttgccgtgagtgaggtactcgacctgctggacgtaccggcagtgcgcgcccgctttgcg
atcgaagaaagcgacctgcccaccttgcaccgctggatcgaaggcgccggcattcgctgg
ggccttagcgcccggcaacgcgccaccctcgggttgcccgagggcctggagcagaacagc
tggcgtttcggcctgcgccgaatgctgctggggtacgcggttggcgtaggcgagggctgc
gatggcatcgagccctacgacgagatcggcgggctcgatgccgccctgatcgggccgctg
gttgccttgctcgacgccctggacatagcctgccaggcactttcgcagccggccacggcc
acgcaatggggcgagcgcctgcatgcgctgctgcagatcttcttcctggccgaaaacgag
cacgacgaactgctgctggtgcagctccaggacctgcgcgacacctggctggaaacctgc
gaggcggtcagcctgcaagacctgctaccgctcaccgtggttcgcgaggcgtggttgtcg
ggcctcgaccagggcaaattgtcccagcgcttcctcgccggttcagtgaacttctgcacc
ttgatgcccatgcgcgccatcccgttccgggtggtctgcctgctgggcatgaacgacggc
gactaccctcgtgcgcagccaccgctggacttcgacctgatggccagcgactaccgcccg
ggcgaccgttcgcgccgcgaagatgaccgctacctgttgctcgaagcgctgctgtcggcg
cgtgaccaactgtacgtcagctgggtcgggcgcagcatccgcgacaacagcgagcgccca
gcctcggtgctgatcggacagttgcgcgatcacctggccgccggctggcaactgaccaac
gccaaaccagggcagaaggacgatgccggtcaacaactgctgcatgccctgacccaggag
cacccgctgcaaccgttcagccagcgctatttccagaaaggcagcccgctgttcagcttt
gcccatgagtggctggtcctgcatcaggatgccgcagaggcccaggcagcccatgccccg
ttgctgccctacagcagcgatgagccattgagcctgacgcagttgcaggattttttgcgc
catcccgtcaggcacttcttcagccagcgcctgaaagtctacttcgaagccctggaagca
cccacgccggacgaagaacccttcgccctcgacgccctgcaacgctacggcctgagtgaa
agcctgctgggtgccgccctggccgagccggacaaccccgagcaggcgctgcaggcccag
gcccgccgcctgcaagcctgcggcctgctgccgctggccgggttcggcgaggcgttgcag
gccgagctgatccagcccctgccagacctgctgcaacgccatgggcaattgctgcagcgc
tggccaacgctggtggaaggcgccttgccgatccacttcgagcacggcctgcaccgcctc
gagggctggctgggccgggtctaccaggccgacgaccagagcctgctgagcatcgccacc
gtgcccaacaccctcagcgccgggcgcaacaacctcaagtggcaccggctgatcccggcc
tgggtcatgcacctggccgcctgcgcctcgggctacccgttgcacagcgccctggtggcc
agcgacctgaccctgctcctggcgcccttgccgcaaggccaggccgccgaacggctgggc
gaactgctggtggcgcgccaggccggcatgaacgcgcccctgcctgtcgcggccaagacc
gccttcgcctggctggcccaggaagacccggacaaggcgcttgccgctgccgcccgcgcc
tacgaaggtgacggcctgatcagccacggcgagcgcagcgaaagcctcgccctggcccgc
cagtacaacgacttcgccgcgctggtgctggatgaaaccttcgaaggctggtgcgaagcc
ctgtaccgccccctgttcgcagcgccctggcagaccctcggcaacccggagagcgcccaa
tga
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