Pseudomonas sichuanensis: LOY51_23860
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Entry
LOY51_23860 CDS
T08582
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psih
Pseudomonas sichuanensis
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psih03000
]
LOY51_23860
Transcription factors [BR:
psih03000
]
Prokaryotic type
Helix-turn-helix
Other families
LOY51_23860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_17
AAA
AAA_2
AAA_5
HTH_30
AbiEi_4
HTH_29
HVO_A0261_N
HTH_50
HTH_28
IclR_C
AAA_16
RWP-RK
NACHT
HTH_7
HTH_22
TsaE
Motif
Other DBs
NCBI-ProteinID:
UVL88754
LinkDB
All DBs
Position
complement(5308238..5310091)
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AA seq
617 aa
AA seq
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MLAANSKAHVDCVSRVLKNAERLPQAPVPPLILDSWRRSMELYRLDPASQQGPRILSQSL
LNECRERAELFLRIASDAVARLHERVRGADYCVLLTDAQGRTIDYRVEAAIRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSKAPVTVHKRDHFRAAFIGLTCTAAPVFDPAGELLGVVD
VSALQSPDDRRSQHLIRQLVEQTAREIENAFFMHSVQGHWVMRAHGTPGYVESQPDYLLA
WDSDGRLQALNSLARQRLLERDGRLPEHIGELFDLDQLRRAHDASAQRLPGWGGLYGRVS
APQRHGRAQPVRQAQDARIEQHLRLATRVKDCNLAVLVQGETGAGKEVFARQLHQQSQRR
EGPFVTLNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQANGGTLFLDEIGDMPLH
LQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAAMVAEGRFREDLYFRLANARFE
LPPLRERDDRLGLIHQLLGEEAAACGVEVLLADAALEALLVYRWPGNLRQLRQVLRYACA
VSEGGELQLQDLPQEVRGDAVDSAEGGASCPARQLLLDALIRHRWKPADAARALGISRAT
LYRRVHEHRIEMPRMKG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactccaaagcccatgtcgactgcgtcagccgggtgctgaagaacgcc
gaacgcctgccccaggcgccggtgccgccgctgatcctcgactcgtggcgccgttccatg
gagctgtaccgcctcgaccctgcctcccagcagggcccgcgcatcctttcgcaaagcctg
ctcaacgaatgccgcgagcgcgccgaactgttcctgcgcatcgccagcgatgccgtcgca
cgcctgcatgagcgggtgcgtggcgccgactactgcgtgctgctcaccgatgcccagggc
cgcaccatcgattaccgggtcgaggcggcgatccgcaacgactgccgcaaggccgggctg
tacctgggcacctgctggtcggaaggcgaggagggcacctgtggggtggcggcggtgctg
accagcaaggcgccggtcacggtgcacaagcgcgatcactttcgcgccgcgttcattggc
ctgacctgcaccgcggcgccggtgttcgacccggccggcgagctgcttggggtggtggac
gtgtcggcgttgcaatcgccggatgaccggcgcagccagcacctgatccgccaactggtc
gagcagaccgcacgggagatcgagaacgccttcttcatgcacagcgtgcagggccattgg
gtgatgcgcgcccatggcacgccgggctacgtcgagagccagccggactacctgctggcc
tgggatagcgatggccgcctgcaggcgctcaacagcctggcccgccagcgtctgctggaa
cgtgacgggcggttgcctgagcatatcggcgagttgttcgacctggaccagttgcgccgc
gcccatgatgcttcagcccagcgcctgccgggctggggtgggctttatgggcgggtcagc
gcgccgcaacggcatgggcgcgcgcagcccgtgcgccaggcgcaggatgcgcgcatcgaa
cagcacctgcgcctggccacgcgggtcaaggactgcaacctggcggtgctggtacagggc
gaaaccggcgccggcaaggaggtgttcgctcgccagctgcaccagcagagccagcgccgc
gaggggcctttcgtcaccctcaactgtgcggccatccccgagagcctgatcgagagcgaa
ctgttcggttatgtcgccggcgccttcaccggcgcctcggccaaaggcatgcagggcctg
ttgcagcaggccaatggcggcacgctgttcctcgacgagatcggcgacatgccgctgcac
ctgcagacccgcctgctgcgggtactggccgaaggcgaggtggcgccgctgggcgcggcg
cggcgcgagcgtgtggatatccaggtgatctgcgccacccaccgtgacctggcggcgatg
gtcgctgaggggcgtttccgtgaggatctgtacttccgcctggccaacgcccgtttcgaa
ttgccgccgctgcgcgagcgcgatgaccggctggggttgatccaccagttgctgggcgag
gaggcggcggcctgcggggtcgaggtgctgttggcggacgcggccctggaggcattgctg
gtgtatcgctggccgggcaatttgcgccagctgcggcaggtgttgcgctatgcctgtgcg
gtgagtgagggcggggagttgcaattgcaggacctgccgcaagaggtgcgcggtgacgcg
gttgattcggctgaaggcggcgcgtcttgcccggcccggcagttgctgctggatgccctg
atccgtcatcgctggaaaccggccgatgcggcgcgggcgctggggatatcgcgggcgacc
ctgtatcgacgcgtgcatgagcaccggatcgagatgccgcggatgaagggctaa
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