Pseudomonas sichuanensis: LOY51_25390
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Entry
LOY51_25390 CDS
T08582
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOY51_25390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_25390
Enzymes [BR:
psih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOY51_25390
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY51_25390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_16
AAA_30
iSirtuin
TrwB_AAD_bind
AAA_19
Zn_ribbon_LysW
HypA
Zeta_toxin
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
UVL89045
LinkDB
All DBs
Position
5665892..5668111
Genome browser
AA seq
739 aa
AA seq
DB search
MSDVILRLALPSPLRRLFDYRATASMARQALTPGMRFRVPFGRREMIGVLVEVADKSEVP
ADKLKPASALLDPVSPLPPALFKLCLWTAQYYQHSLGDTLNWALPTLLRQGEPAEVRQER
FWHVAAGARLEDPRIARAPRQREALKTLSQHPHGVAHSLLSKLGLNKDSLDLLLAKDLVE
VETRRHLPAARHEHWLAQPELPLNEEQRAAFEAVRSGFGAFHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALILIPEINLGPQTLQRFEQRFNARIALLHSAVGDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLAVVRAHQENIPILLGS
ATPSLESLHNAHSGRYGLLRMNQRAGGARAPRFLRLDVRSLPLDSGISGPLQQAIRQTLE
AGQQVLVFLNRRGFAPTLLCHDCGWLSECPRCDARMTVHQRSAVLRCHHCGYDERLPLQC
PQCAHVDLRPVGAGTERAEERLKVLFPDYPILRVDRDSTSRKDAMHNLFTTIQRGQPSIL
VGTQMLAKGHHFPRVTLVAILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVIV
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRADAHKPGQAEGFLDEA
CAAAERVLAEQGLHGIELLGPVPAPMERRAGRFRAQLLLQANARAQLHRLISAWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgtcatcctgcgccttgccctgccctcgcccctgcgtcgcctgttcgactac
cgggccaccgcaagcatggcgcgccaggccctgacccccggcatgcgctttcgcgtgccg
ttcggccgccgggaaatgatcggcgtgctggtggaggtggccgacaaaagtgaagtgccg
gcggacaagctcaagcccgccagtgccttgctcgacccggtctcgccactgccgccggcg
ctgttcaagctgtgcctgtggacagcgcagtactaccagcacagcctgggcgacaccctg
aactgggcgctacccaccctgttgcgccagggcgagccggccgaagtgcggcaggagcgc
ttctggcatgtcgccgccggggcgcgcctggaagacccgcgcattgcccgtgcgccgcgc
cagcgcgaggccctgaagacgctttcgcagcacccacacggtgttgcccacagcctgctg
agcaagctcggcctgaacaaggacagcctcgacctgctgctggccaaggacctggtcgag
gtggagacccgccgccacctgccagccgcccgtcacgagcactggctggcccagccggag
ctgccgctcaacgaagaacagcgcgccgccttcgaggccgtgcgctcaggcttcggcgcc
ttccacgcgttcctgctggcgggcgtcaccggcagcggcaagaccgaggtctacctgcaa
ctgatccgcgaaaccctggaggccggcaaacaggcgttgatcctgatccccgagatcaac
ctcggcccgcagaccttgcagcgcttcgagcaacgcttcaatgcacgcatcgccctgctg
cactcggcagtaggcgaccgcgagcgcctggacgcctggctggcggcgcgcgacggcgag
gcggacatcatcatcggcacccgttcggcgctgttcacgccaatgaagaacccggggctg
atcatcatcgacgaggagcacgacggctcctataaacagcaggaaggcctgcgctaccac
gcccgcgacctggcggtggtgcgcgcgcatcaggagaacatcccgatcctgctgggctcg
gccaccccgtcgctggagagcctgcacaacgcccacagcggccgctacggcctgctgcgc
atgaaccagcgcgccggcggtgcccgcgcaccgcgcttcctgcgcctggacgtgcgcagc
ctgccactggacagcggcatcagcggcccactgcagcaagcgatccgccagaccctggag
gccggccaacaggtgctggtgttcctcaaccgccgcggcttcgccccaaccctgctgtgc
cacgactgcggctggctttcggaatgcccgcgctgcgacgcgcgcatgaccgtgcaccag
cgctctgccgtgctgcgctgccaccactgcggttacgacgagcgcctgccgctgcagtgc
ccgcaatgcgcccacgtcgacctgcgccccgtaggtgccggcaccgaacgtgccgaagaa
cgcctgaaggtgctgttccccgactacccgatcctgcgcgtggaccgcgacagcacctcg
cgcaaggacgccatgcacaacctgttcaccaccatccagcgcggccagccgagcatcctg
gtcggcacccagatgctggccaaggggcaccacttcccgcgggtgaccctggtggcgatc
ctcgatgccgacggcgggctgttctctggcgatttccgcgccagcgagcgcatggcccag
ctgatcgtgcaggtggcgggccgcgccgggcgcgccgaagaaccgggcaaggtcatcgtg
cagacccacctggccgaccatccgttgctggtgcaactgaccgaacagggctacttcgcc
tttgccgaacaggccctgagcgaacgccgcgccgccggcctgccgccgttcgcccacctg
gccctgctgcgcgccgatgcgcacaagcccggccaggccgaaggtttcctcgacgaggcc
tgcgccgccgccgagcgcgtgctggccgaacagggcctgcatggcatcgagctgctgggc
ccggtgccggcgcccatggagcgacgggcggggcgattccgtgcgcaactgttgctccag
gccaatgcccgggctcagttgcatcgactgatcagcgcctggttgctagtgttggagcag
atgccgtccgggcggcaagtgcgctggtcgctggatgtcgacccggtcgacctttattga
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