Pseudomonas sichuanensis: LOY51_26670
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Entry
LOY51_26670 CDS
T08582
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psih
Pseudomonas sichuanensis
Pathway
psih03420
Nucleotide excision repair
psih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOY51_26670 (uvrD)
03430 Mismatch repair
LOY51_26670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psih03400
]
LOY51_26670 (uvrD)
Enzymes [BR:
psih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOY51_26670 (uvrD)
DNA repair and recombination proteins [BR:
psih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOY51_26670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LOY51_26670 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
AAA_22
Viral_helicase1
AAA_11
DUF5681
Motif
Other DBs
NCBI-ProteinID:
UVL89288
LinkDB
All DBs
Position
5945592..5947775
Genome browser
AA seq
727 aa
AA seq
DB search
MRNDDLSLLLNSLNDAQRQAVAAQVGRQLVLAGAGSGKTRVLVHRIAWLIQVVGASPHSI
LSVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLVQNFQILDSD
DQQRLIKRVIRELGFDEQKWPARQVQWFINGQKDEGLRPRHIQAGGDLYLTTMRDIYSAY
EQACERAGVIDFAELLLRALDLWRDQPGLLEHYQRRFRHILVDEFQDTNAVQYAWLRLLG
AGGDSLMAVGDDDQSIYGWRGAKIENIHQYTSDFPDAEMIRLEQNYRSTGGILKAANALI
ANNSGRLGKELWTDMGEGEPITLYAAYNEHDEARYVVETIEGLIKQGNARNEIAILYRSN
AQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRG
IGEKTVEAIRDHARHSQVSMWEAMCQLLAGKALKGRAASALGAFIELIEQLAAKVLDMPL
HLMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFETSDEDADLTPLSAFLGH
ASLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERR
LAYVGITRAMRQLIMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGA
KAPASNLFANASIPETAFNLGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgatgacctctccctcctgctgaactccctcaacgacgctcaacgccaggcc
gtagcggcccaggtcgggcggcaattggtcctggccggtgccggctcgggcaagacccgg
gtgctggtgcaccgtatcgcctggctgatccaggtcgtaggggcctccccacattcgatc
ctgtcggtgaccttcaccaacaaggcggcggcggaaatgcgccagcggatcgagcaactg
ctgggcatcaacccggccggcatgtgggtcggcacgttccacggcctggcccaccgcctg
ttgcgagcgcactggcaggaagcggggctggtgcagaacttccagattctcgacagcgac
gaccagcagcgcctgatcaagcgggtgatccgcgagctcggcttcgacgagcagaagtgg
ccggcgcgccaggtccagtggttcatcaacggccagaaggacgagggcttgcgcccacgc
cacatccaggcgggcggcgacctctacctgaccaccatgcgcgacatctatagcgcctac
gaacaggcctgcgagcgcgccggggtcatcgacttcgccgagctgctgctgcgcgccctc
gacctgtggcgtgaccagccgggcctgctcgagcactaccagcgccgcttccggcacatc
ctggtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctcggc
gccggtggcgacagcctgatggcggtgggcgacgacgaccagtcgatctacggctggcgc
ggcgcgaaaatcgagaacatccaccagtacaccagcgacttccctgacgccgagatgatc
cgcctggagcagaactaccgctccaccggtggcatcctcaaggccgccaacgccctgatc
gccaacaacagcgggcgcctgggcaaggagctgtggaccgacatgggcgagggcgagccg
atcaccctctacgccgcgtacaacgagcacgacgaagcgcgctacgtggtcgagaccatc
gaaggcctgatcaagcagggcaatgcgcgcaacgaaatcgccatcctgtaccgctccaac
gcccagtcacgggtgctggaagaggccctgctgcgcgaacgtattccctaccgcatctac
ggcggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgcctg
ctcgagggccgcggcaacgacgccgccctggaacgggtgatcaacgtgccgccgcgcggc
atcggtgaaaaaaccgtcgaggccatccgcgaccatgcccgccacagccaggtgtcgatg
tgggaagcgatgtgccagctgctcgccggcaaagcgctgaagggccgcgccgccagcgcc
ctgggcgcgttcatcgagctgatcgagcagcttgccgccaaggtgctggacatgccgctg
cacctgatgacccagacggtcatcgagcagtccggcttgatcatctatcaccaggaagaa
aaaggcgaaaagggccaggcacgggtagaaaaccttgaagaactggtcagcgccgcacgc
aacttcgagaccagcgacgaagatgccgacctgacgccgttgtcggcgtttctcggccac
gcttcgctggaggccggcgacacccaggccgacgagcacgaggacagcgtccagctgatg
accctgcacagtgccaagggcctggaattcccctacgtgttcctggtgggcatggaagaa
gggttgttcccgcacaagatgagcctggaagagcctggccgtctggaagaggaacgccgc
ctggcttacgtgggcatcacccgggccatgcgccagctgatcatgacctacgccgagacc
cgtcgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtacgcgaaattccg
gccggtctggttcaggaagtacgcctgtcgaactcggtcagccgcccgttcggcggcgcc
aaggccccggccagcaacctgttcgccaacgccagcattcccgagaccgccttcaacctc
ggccagcgcgtgcagcacgcggtgttcggtgagggcgtgatcctcaacttcgagggcgca
ggcgcgcaggcaagggtgcaggtgaacttcgctgaaggcagcaagtggttgatgctgggg
tatgcgaagctcgaggctatctga
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