Pseudomonas siliginis: NF676_00715
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Entry
NF676_00715 CDS
T08569
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psii
Pseudomonas siliginis
Pathway
psii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NF676_00715 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_00715 (choX)
Transporters [BR:
psii02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NF676_00715 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UST79874
LinkDB
All DBs
Position
complement(28445..29365)
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AA seq
306 aa
AA seq
DB search
MRKLSTAVTVGLIALSSASAFAEQSCETVKMADPGWSDIAATNAITGFLLDGMGYKAKVD
TLAVPITFGGLKDGQVDVFLGNWMPAQQGFYDKFVATGDVTQLAKNLEGTEFTLAVPDYV
WEAGVHDFADLNKFADKFDKKIYGIGSGAPANISLQEIIKKNDFNMGQWKLIESSEQAML
AEVSRAVKKQKFVTFLGWTPHPMNVQLKMRYLKGGEKYFGDTGSVFTLTRKGYAEACPNV
GKLLTNLAFTQDMENSIMAEVVNKKISNAEAAKAWIKANPAVLDKWLDGVKTVDGKDALV
AVKAKL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagttatccacagctgtcactgtcggcctgatcgcattgagcagcgcctcggcg
ttcgccgagcaaagctgcgagaccgtgaagatggccgatccgggctggagcgacatcgcc
gcaaccaatgccatcaccgggtttctgctggacggcatgggctataaggccaaagtcgac
acccttgcagtgccgatcaccttcggcggcttgaaggatggccaggttgacgtgttcctc
ggcaactggatgccggcgcagcagggcttctatgacaagttcgtcgctactggcgatgtg
acgcaattggccaaaaacctggaaggcaccgaattcaccctcgccgtccccgactatgtc
tgggaggcgggtgtgcatgattttgccgacctgaacaaattcgccgacaagttcgacaag
aagatctacggcatcggctcaggcgcgccggcgaacatttcgctgcaggagatcatcaag
aagaacgacttcaacatgggccagtggaagctgatcgagtccagcgaacaggcgatgctc
gccgaagtgtcgcgggcggtgaagaaacagaaattcgtcaccttcctcggctggaccccg
cacccgatgaacgtgcagctgaaaatgcgttacctcaagggcggcgaaaaatacttcggc
gacaccggcagcgtctttaccctgacccgcaagggctacgccgaggcctgcccgaatgtg
ggcaagttactgaccaatctggccttcacccaggacatggagaacagcatcatggccgag
gtggtgaacaagaagatcagcaatgccgaagcggcgaaggcgtggatcaaggccaatccg
gcggtgctggacaagtggctggatggcgtgaagaccgtggatggcaaggatgcgttggtg
gcggtgaaggccaagctttga
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