Pseudomonas siliginis: NF676_01205
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Entry
NF676_01205 CDS
T08569
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psii
Pseudomonas siliginis
Pathway
psii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NF676_01205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psii03021
]
NF676_01205
Transcription machinery [BR:
psii03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NF676_01205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_11
HTH_29
HTH_24
GerE
HTH_Tnp_ISL3
MPAB_Lcp_cat
Xre-like-HTH
HTH_31
HTH_Tnp_4
HTH_7
PCI
HTH_17
HTH_28
HTH_3
FeoB_Cyto
HTH_40
PapC_N
Motif
Other DBs
NCBI-ProteinID:
UST79966
LinkDB
All DBs
Position
complement(130760..131260)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPELVVQALYGSHHGWLNAWLRARLGNAADAADLAQDTFLRLLQRTERLELKAPRAFL
RTIARGLVIDHWRREEIERAYLETIAHLPEGEVPDAESRALVLELLESIARMLEGLKPKV
RQAFLLAQCEGLTHKQIAEQLGVSVRSVERYVADALYHCYVLRYES
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacctgagttggtcgtacaggcgctttacggtagtcatcacggctggctcaac
gcttggctgcgcgcgcggctgggcaacgcagcggatgcggcggatctggctcaggacact
ttcctgcgcctgctgcaacgcaccgaacgcctcgaactcaaagcgcctcgcgctttcctg
cggaccatcgcgcgcggcctggtgatcgatcattggcgtcgcgaggaaatcgagcgggcc
tatctggaaaccattgctcatttgcctgaaggcgaagtacctgacgccgaatcgcgcgcg
ttggtgctggaactgctggaaagcattgcgcgcatgcttgagggtttgaagccgaaagtg
cgtcaggcgtttctcctggcgcagtgcgaaggtttgactcacaaacagatcgccgagcag
ttgggcgtgtcggtacgttcagtggaacgctacgtcgccgatgcgctgtatcactgctat
gtgttgcgatatgaaagctga
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