Pseudomonas siliginis: NF676_01360
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Entry
NF676_01360 CDS
T08569
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
psii
Pseudomonas siliginis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_11
TPR_14
TPR_7
TPR_16
TPR_2
TPR_1
TPR_17
TPR_9
TPR_12
SlipAM
TPR_8
Motif
Other DBs
NCBI-ProteinID:
UST79996
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Position
182902..185382
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AA seq
826 aa
AA seq
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MPRIDGPVLHRGLRPLFRFALCSQLLWPLLALADTPYDEMVRDARAGHYTPALTVLRQVP
PGQASEGQISDHLQIASWAGLDAEVVKVYETQGRDRVLPVQALTAVARAYRNLKRWDQAT
QVYNKALVLEPDNADLQLGLALTQADAGKPDQAVTRAQALVAAKPDDPSRRLALGYALGR
AGKQYDALFEYDQAFIRAGNKPEVAREYVVALQKARLPEPALRLASQRPGLIDPVTLRRL
EGDLAAERVRLAELATRSEKERYVIADRALADYDKLLATWTPDATAHDDVTRWRIDRMGA
LKARARTADVISEYQKLQAEGVEIPTYALRWVAASYLDQREPEIATDLYRQVLSAPDADV
GDRLEDSTALYYSLLESDRADEARKVAEDAAKAQRPRVELKGLPIGNPNDEWMDAQQLAA
QAGTYGSDLPHGEERLQTLVDQAPGNLGLRLAQADLYLARQWPRRAENQLKETESMAPRD
AGLEVAQARTAMELQEWRQNDALVDDVVARYPDNRQVQRLAREREVHDMAELRVEAYGGK
ANGGGSGDAGAVSGSRDFGIQSTLYSPPINEDWRVFAGAGYATGDFAEGTGHHRFQRVGL
ERRTRDMTLEAEVSNHDYGFGDKQGARLAIARDINDHWQYGGSLEYLSAETPLRALNSDI
KANGGSAFLRWRANESREWRVSVSPSHFSDGNNRVEALVTGREGIYTAPNIQVDAGLEVG
TSHNSKSDDVPYFNPKSDFSVMPLVNVNHVLYHRYETSWSQQFQAGAGTYSQRDHGTGGM
ALLGYGQRYAWNDVFDVGGMFSVINRPYDGDRETDLRLLVDLTFRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtattgatggccctgtattacatcgtggtttacgccctttgttccgattcgcc
ctgtgcagccagttgctctggccgctgctggcgttggccgacacaccctacgacgagatg
gtgcgcgatgcccgggccgggcattacacgcctgcgttgaccgtgctgcgtcaggtgccg
ccgggccaggccagcgaaggccagatcagcgatcatctgcaaatcgccagttgggccggg
ctcgatgccgaagtggtcaaggtctatgaaacccaaggccgtgaccgcgttctgccggtg
caggcgctgactgccgttgcgcgtgcctatcgcaacctcaagcgctgggatcaggccacc
caggtgtacaacaaggcgctggtgctggagccggacaacgccgacctgcaactgggtctc
gcgctgactcaggccgatgccggcaagcccgatcaggccgtcacccgcgcccaggcgctg
gtcgccgccaaacccgacgatccgtcacgccgtctcgccttgggctacgcactcggtcgc
gccggcaaacagtacgacgcactcttcgaatacgatcaggccttcatccgcgccggcaac
aagccggaagttgcccgcgagtacgtggtcgccctgcaaaaggcccgcctgccagaaccg
gcgctgcggctggccagtcaacgtcccggcctgattgatccggtgaccttgcgccgcctg
gaaggcgatctcgccgccgaacgcgtgcgcctcgccgaactggccacccgcagcgaaaag
gaacgctacgtcattgccgaccgcgcgctggccgattacgacaaattgctcgcaacctgg
acccctgacgccactgctcacgatgacgtgacgcgctggcgcatcgaccgcatgggcgcg
ctcaaggcgcgggcgcgcaccgccgacgtcatcagcgaatatcaaaagctgcaagccgaa
ggcgtggaaattccgacctatgccctgcgctgggtggcagcgtcttatctggatcagcgt
gagcccgagattgccaccgatctgtatcgccaggtgctttcggcgccggacgccgatgtc
ggtgatcgtcttgaggacagcactgcgctttactactcgctgctggaaagcgaccgcgcc
gatgaagcacgcaaggtcgccgaagacgcagcgaaagcccagcgtccgcgcgtcgagctc
aaaggtctgcccatcggcaaccccaacgatgaatggatggacgcccagcaactcgccgcc
caggccggtacctacggttccgatcttccgcacggtgaagagcgtttgcagactttggtc
gatcaggcgccgggcaaccttggcttgcgtctggcccaggccgatctttacctcgcccga
cagtggccgcgccgcgcggaaaatcagctcaaggaaaccgagagcatggcgccccgcgat
gccggcctggaagtcgctcaggcgcgcaccgcgatggagttgcaggagtggcggcagaac
gatgcgctggtcgacgatgtggtcgcgcgttatccggacaaccgccaagtgcagcgcctg
gctcgcgaacgggaagtgcatgacatggccgaactgcgcgtcgaagcctacggcggcaag
gccaacggtggcggcagcggcgatgccggtgcggtcagcggcagccgtgatttcggtatc
cagagcacgctgtacagcccgccgatcaacgaagactggcgtgtcttcgccggggccggt
tatgccaccggtgatttcgccgaaggcaccggccaccatcgcttccagcgtgtcggcctg
gaacggcgcacccgtgacatgaccctcgaagccgaggtgtcgaatcacgattacggcttc
ggtgacaaacaaggcgcacgcctggcgatagcccgcgacatcaacgatcactggcagtac
ggcggcagcctcgaatacctctcggcggaaacgccgctgcgcgcgctcaacagcgacatc
aaggccaatggcggcagtgcgttcctgcgctggcgcgccaacgaaagccgcgagtggcgc
gtgtcggtcagcccgtcgcacttcagcgatggcaacaaccgcgtcgaagccttggtgacc
gggcgcgagggcatctacaccgcgccgaacattcaggtcgacgctggtctggaagtcggc
accagccacaactcgaaatccgacgacgtgccgtacttcaacccgaagtcggacttcagc
gtgatgccgctggtcaacgtcaatcacgtgctctaccaccgctacgaaacttcctggagc
cagcaattccaggccggcgcgggcacctacagccagcgcgaccacggcaccggcggcatg
gcgttgctcggttacggccaacggtacgcctggaacgacgtgttcgatgtgggcggcatg
ttcagtgtgatcaaccggccttatgacggtgatcgggaaactgatctgcgtctgcttgtc
gacctcactttccgcttctag
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