Pseudomonas siliginis: NF676_01400
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Entry
NF676_01400 CDS
T08569
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00250
Alanine, aspartate and glutamate metabolism
psii00310
Lysine degradation
psii00350
Tyrosine metabolism
psii00650
Butanoate metabolism
psii00760
Nicotinate and nicotinamide metabolism
psii01100
Metabolic pathways
psii01120
Microbial metabolism in diverse environments
Module
psii_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NF676_01400 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NF676_01400 (gabD)
00310 Lysine degradation
NF676_01400 (gabD)
00350 Tyrosine metabolism
NF676_01400 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NF676_01400 (gabD)
Enzymes [BR:
psii01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NF676_01400 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NF676_01400 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NF676_01400 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UST80003
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Position
192505..193947
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDA
VYDAFAEKLKVAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVSKGATVLAGGKA
MEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggtc
gatgccgacaacggtcagacgatcaaggtcaacaacccggcaaccggcgaaatcctcggc
accgtgccgaagatgggcgccgctgaaacccgccgtgccatcgaggccgccgacaaggcg
ctgccggcctggcgtgcactgaccgccaaagagcgtgccggcaaactgcgtcgctggttc
gagctgatgatcgagaaccaggacgacctcgcgcgcctgatgaccctcgagcagggcaag
ccgctggccgaagccaagggcgaaatcgtttacgccgcatcgttcatcgagtggttcgcc
gaggaagccaaacgcatctacggtgacgtgattccgggtcatcagccggacaagcgcctg
atcgtcatcaaacaaccgattggcgtcaccgccgcgatcaccccgtggaacttcccggcg
gcaatgatcactcgcaaggccggcccggcgctggccgccggttgcaccatggtgctcaag
ccagcatcgcaaactccattttccgctttcgccctggccgaactggctcagcgcgcgggc
attcctgcgggcgtgttcagcgtggtctccggcagcgctggcgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaactgtccttcaccggctcgaccgaaatcggtcgccag
ttgatggccgaatgcgccaaggacatcaagaaagtctcgctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgccgatctggataaggccgtcgaaggcgcgatcatctcc
aaataccgcaacaatggccagacctgcgtctgcgccaaccgtctgtacattcaggacgcg
gtctacgatgcgttcgccgagaagctgaaagtagctgtagccaaactgaagatcggcaac
ggtctggaagacggcaccaccaccggcccgctgatcgacgaaaaagccgtggccaaggtt
caggaacacatcgctgacgccgtgagcaaaggtgccaccgtattggcgggcggcaaggcg
atggaaggcaacttcttcgagccgaccattctcaccaacgtgccgaaaaacgcggccgtg
gccaaggaagaaaccttcggtccgctggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgccatgtccaacgacaccgaattcggtctggcctcgtacttctacgcacgtgac
ctcggccgtgtgttccgtgtcgccgaagcgctggaatacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgttcggcggcatcaaggcttcgggcctgggccgt
gaaggctccaagtacggcatcgaagactacctggaaatcaaatacctctgcctgggcatc
taa
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