Pseudomonas siliginis: NF676_03080
Help
Entry
NF676_03080 CDS
T08569
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
psii
Pseudomonas siliginis
Pathway
psii02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NF676_03080 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psii02000
]
NF676_03080 (msbA)
Enzymes [BR:
psii01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NF676_03080 (msbA)
Transporters [BR:
psii02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NF676_03080 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
DEAD
AAA_30
RsgA_GTPase
NB-ARC
nSTAND3
nSTAND1
AAA_33
DUF815
Motif
Other DBs
NCBI-ProteinID:
UST80321
LinkDB
All DBs
Position
568477..570282
Genome browser
AA seq
601 aa
AA seq
DB search
MTDAPPKAEQESSLKIYFRLLGYVKPYIGLFLLSIVGFVIFASTQPMLAGILKYFVDGLS
NPEAVLFPNVPYLRDVQLLMAVPLLIILIAAWQGLGSFLGNYYLARVSLGLVHDLRIELF
NKLLVLPNRYFDTHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFAYLLWMNW
KLTLVMLAILPVIAFMVGNTSKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAY
EQQRFAAASQSNTDKQLRMTKTGAVYTPMLQLVIYTAMAVLMFLVLFLRGDATAGDLVAY
ITAAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEIDTGTIERDRVSGHLAVNNL
SFTYPGTEREVLKNISFTASPGQMIALVGRSGSGKSTLASLIPRFYHHETGEILLDDVEI
EDYRLRNLRRHVAQVTQHVTLFNDTIANNIAYGDLAGAPREDIEKAARDAFAMDFIAQMP
QGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVM
KGRTTLVIAHRLSTIEKADLILVMDQGEIVERGTHAQLLAHNGYYARLHAMGLDAPAEDI
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcaccgcccaaagcggaacaggaatccagcctgaaaatctactttcggctg
ttggggtacgtaaaaccctatatcggtcttttcctgctgagtatcgtgggcttcgtgatc
tttgcttccacgcaaccaatgctggccgggattctcaagtattttgtcgatggcctgagc
aacccggaagcggtgctcttccccaacgttccctatctgcgagacgtgcaattgctgatg
gctgtgccgttgctgatcatcctgatcgcagcgtggcaaggcctcggctcgtttctcggc
aactattacctggcgagggtttcgttggggctggtgcatgacctgcgtatcgaattgttc
aacaagctgttggtattgcccaatcgctatttcgatacccataactcgggtcatctgatc
tcgcgcatcactttcaacgtgaccatggtcaccggcgccgccacggatgccatcaaagtg
gtgatccgcgaaggcctgaccgtggttttcctgttcgcctatctgctgtggatgaactgg
aaactgactctggtgatgctggccattctgccggtgatcgcgttcatggtcggcaacacc
agcaagaaattccgcaagcagagcaagaagattcaagtggccatgggcgacgtcacccat
gtggcttccgaaaccattcaaggctatcgcgtcgtgcgcagttttggtggcgaagcttat
gagcagcagcgttttgcggcggccagccagagcaacaccgacaaacagttgcgcatgacc
aagaccggcgcggtgtatacgccgatgctgcagctggtgatctacaccgccatggccgta
ctgatgttcctcgtactgttcctgcgcggtgatgcaacggccggtgatctggttgcctac
atcacagctgccgggttgctgcccaaaccgatccggcaattgtctgaagtcagctcgacc
atccagaaaggcgtggccggcgccgaaagcattttcgagcaactcgatgttgaaccggaa
atcgacacaggtacgatcgagcgtgatcgggtcagtggccatctggcggtgaacaacctc
agcttcacttacccgggcactgaacgggaagtgctgaaaaacatcagcttcaccgcgtcg
ccaggtcagatgatcgccctggtcgggcgttccggcagcggcaaatcgacgctggccagt
ctcattccgcgcttctatcaccacgagaccggcgaaatcctgctcgatgatgtcgaaatc
gaggactatcgtctgcgcaatctgcgccgccatgtagcgcaagtgacccagcacgtgacg
ctgttcaacgacaccatcgccaacaacatcgcttacggcgatctggcaggcgcgcctcgc
gaagatatcgagaaagccgccagggatgcatttgccatggacttcatcgcgcagatgcct
caaggcctggatacccaggtcggcgagaacggtgtgctgttgtctggcggacagcgtcag
cgcctggcgattgcccgggccttgctgaaaaacgccccgctgctgatcctcgacgaagcg
acgtcggcccttgataccgagtccgagcggcacattcaggcggcactcgaccatgtcatg
aaaggccgcaccacgctggtgattgcccaccgtttgtcgaccatcgagaaggccgatctg
atcctcgtcatggatcagggcgagatcgtcgaacgcggcactcatgcccaactgcttgct
cataatggctactacgcgcgtctgcatgcgatggggctggatgctccggctgaagacatt
gcctga
DBGET
integrated database retrieval system
