Pseudomonas siliginis: NF676_03115
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Entry
NF676_03115 CDS
T08569
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
psii
Pseudomonas siliginis
Pathway
psii00540
Lipopolysaccharide biosynthesis
psii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NF676_03115 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psii01005
]
NF676_03115 (waaA)
Enzymes [BR:
psii01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NF676_03115 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NF676_03115 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
NF676_03115 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
NF676_03115 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
psii01005
]
Lipid A
NF676_03115 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
UST80328
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Position
576418..577692
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AA seq
424 aa
AA seq
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MNRTLYTALFYLGLPLVAIRLWLRARKAPAYAKRIGERFTYRMPTLQPGGIWVHAVSVGE
SIAAAPMIRALLDRYPTLPITVTCMTPTGSERIQALFANEPRIQHCYLPYDLPCAAARFL
DRVQPRLAVIMETELWPNHIHQCAKRGIPVALANGRLSQRSAKGYGRFSKLTAPMLAEMS
LLAVQTAAEAQRFRDLGARPETVEVTGSIKFDLTIDPQLLQRAAELRSRWQAQDRPVWIA
ASTHEGEDEVVLDAHRRLLGSHPDALLILVPRHPERFNSVFDLCQREGFATVRRSTGANV
DAQTSVLLGDTMGELLFLYALADSAFVGGSLVPNGGHNLLEPAALAKPVLSGPHLFNFLD
IAAQLREAGALAEVDDAEGLAVEVQRLFELPRDAQRMAEAGLAVMRRNQGALQRLLDSLG
RLIK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaactctctacaccgcgctgttttacttggggctgccattggtggcgattcgg
ctatggctgcgtgcgcgcaaggcgccggcgtatgccaaacggattggcgaacgtttcact
tatcgcatgcccaccctgcagcccggtggcatctgggtgcacgcggtgtcggtcggcgaa
agcattgccgccgcgccgatgatccgcgcgctgctggaccgctatccgacgctgccgatc
accgtgacctgcatgaccccgaccggttcggagcggattcaggcactgttcgccaacgag
ccgcgcattcaacactgctatctgccgtatgacttgccttgtgcggcggcgcgttttctt
gatcgcgtacagcccaggcttgcagtgatcatggagaccgagctgtggcctaaccatatt
catcaatgtgccaagcgcgggattccggtggcgttggccaatgggcggttgtcgcagcgt
tccgccaaaggctatggccgcttcagcaaactcactgcgccgatgctcgccgagatgagt
ttgctggccgtgcagaccgcagccgaggcccagcgcttccgcgatcttggcgcacgtccg
gaaactgtcgaggtcaccggttcgatcaagttcgacctgaccatcgacccgcaactgttg
cagcgtgcagccgaactgcgcagccggtggcaggcgcaggatcgcccggtatggatcgct
gcgagcacccacgaaggcgaagacgaagtggtgctcgacgcccatcgtcgtttgctgggc
agtcatcccgatgcgttgctgattctggtgccgcgtcatcccgagcgtttcaattcggtg
ttcgacttgtgccagcgcgaaggtttcgccacggtacgtcgctcgaccggggccaatgtc
gatgcgcaaacgagcgtgctgctcggcgacaccatgggtgagttgctgtttctctatgcc
ctggccgacagcgcatttgtcggcggcagtctggtgccgaacggcgggcacaacctgctc
gaacccgccgcgctggcgaaaccggtactcagcggcccacacctgttcaacttcctcgac
atcgccgcgcaactgcgcgaagccggggcgttggccgaagtggatgatgccgaagggctc
gcagtcgaggtgcagcgcttgttcgaactgccgcgtgatgcgcagcgcatggccgaggcc
gggctggcggtgatgcggcgcaatcagggcgcgttgcagcggctgctggatagcttgggc
agattgatcaagtaa
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