Pseudomonas siliginis: NF676_04520
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Entry
NF676_04520 CDS
T08569
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psii
Pseudomonas siliginis
Pathway
psii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF676_04520 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psii03019
]
NF676_04520 (pnp)
03016 Transfer RNA biogenesis [BR:
psii03016
]
NF676_04520 (pnp)
Enzymes [BR:
psii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NF676_04520 (pnp)
Messenger RNA biogenesis [BR:
psii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NF676_04520 (pnp)
Transfer RNA biogenesis [BR:
psii03016
]
Prokaryotic type
tRNA degradation factors
NF676_04520 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UST80588
LinkDB
All DBs
Position
919075..921180
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWNWAPAPEA
TELLGAIRAEFGEAISQAYTITIKADRYARLGELKDQVVAKLSGEEGQPSAAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgaccgttaccctcgagacaggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgttgtcggtgcaaagcaagccgatccgggcaagggtttcttccctctgtcc
gtgcactaccaggaaaagacttacgccgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccattcgacggcccgatcggcgccgctcgcgtggctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtgctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgttcgctcacgacgaattccaggttgtgatcaacgctgtt
aaggaactggctgccgaagccgccaagccaacctggaactgggctcctgcgccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccatcaaggccgaccgttacgctcgcctgggtgagctgaaggaccaagtggtcgcc
aagctgtccggtgaggaaggccagccaagcgctgctgaagtcaaagcagccttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacaccaagactgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggctctgttcacccgtggcgagacccaggcactggttgttgcaacactgggcaccgcc
cgtgacgcgcaactgctggacaccctggaaggtgaaaagaaagacccgttcatgcttcac
tacaatttcccgccgttctcggtaggcgagtgtggtcgcatgggtggcgccggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtgtgcggtgcttccctggcactgatggacgctggtgtaccgatgaaggca
ccggtagccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatcctcggcgacgaagatcacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgttactgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaggcccttgaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggatgccgcagaagctgctcgtcagcgcgttctgagcatcacggcagaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgtt
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtattggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagctgccaaagcttcgggc
gtttaa
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